RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 SLC25A45Q8N413 288 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 GLYATL2Q8WU03 294 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 WNT2BQ93097 391 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 RNF122Q9H9V4 155 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 ZDBF2Q9HCK1 2354 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 KMT2EQ8IZD2 1858 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 MED6O75586 246 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 DEDDO75618 318 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 JTBO76095 146 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 F12P00748 615 aaPredicted RBP12.74□□□□□ -0.37
CLN6-215ENST00000636674 FOLR2P14207 255 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 F2RL1P55085 397 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 SPEM2Q0P670 501 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 UBE2V2Q15819 145 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 AVPI1Q5T686 147 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 FAM69BQ5VUD6 431 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 OPN5Q6U736 354 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 TMEM200AQ86VY9 491 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 GJC3Q8NFK1 279 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 SPACA9Q96E40 222 aaPredicted RBP12.74□□□□□ -0.37
CLN6-215ENST00000636674 NELFAQ9H3P2 528 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 FAM96BQ9Y3D0 163 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 C5orf63A6NC05 138 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 CRYM-AS1A6NIL9 109 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 OR2J2O76002 312 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 CYC1P08574 325 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 SFTA3P0C7M3 94 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 RPL12P30050 165 aaKnown RBP12.74□□□□□ -0.37
CLN6-215ENST00000636674 H3F3AP84243 136 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 ENDOGQ14249 297 aaKnown RBP12.74□□□□□ -0.37
CLN6-215ENST00000636674 IAH1Q2TAA2 248 aaPredicted RBP12.74□□□□□ -0.37
CLN6-215ENST00000636674 ZNF385CQ66K41 422 aaPredicted RBP12.74□□□□□ -0.37
CLN6-215ENST00000636674 OR5D18Q8NGL1 313 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 FNDC9Q8TBE3 224 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 TMEM54Q969K7 222 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 LIN37Q96GY3 246 aaPredicted RBP12.74□□□□□ -0.37
CLN6-215ENST00000636674 ZNF160Q9HCG1 818 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 COA4Q9NYJ1 87 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 WNT16Q9UBV4 365 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 EDARQ9UNE0 448 aa12.74□□□□□ -0.37
CLN6-215ENST00000636674 MEX3AA1L020 520 aaKnown RBP12.73□□□□□ -0.37
CLN6-215ENST00000636674 K7EPK0 472 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 RCC1P18754 421 aaPredicted RBP12.73□□□□□ -0.37
CLN6-215ENST00000636674 SERPINA2P20848 420 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 FAM3AP98173 230 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 PDZK1IP1Q13113 114 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 SULF2Q8IWU5 870 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 FAM71E2Q8N5Q1 922 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 WDSUB1Q8N9V3 476 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 SEMA6DQ8NFY4 1073 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 NABP1Q96AH0 204 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 Q96M66 194 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 SPSB2Q99619 263 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 ARV1Q9H2C2 271 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 ESRP2Q9H6T0 727 aaKnown RBP12.73□□□□□ -0.37
CLN6-215ENST00000636674 GSKIPQ9P0R6 139 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 MCTS1Q9ULC4 181 aaKnown RBP12.73□□□□□ -0.37
CLN6-215ENST00000636674 PCDHGA1Q9Y5H4 931 aa12.73□□□□□ -0.37
CLN6-215ENST00000636674 IGKV1D-8A0A087WSZ0 117 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 DHRS7CA6NNS2 312 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 FARS2O95363 451 aaKnown RBP12.72□□□□□ -0.37
CLN6-215ENST00000636674 TIAF1O95411 115 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 APOC1P02654 83 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 OPN1LWP04000 364 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 IFNA4P05014 189 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 SFTPBP07988 381 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 CSNK1A1P48729 337 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 DVL1P1P54792 670 aaPredicted RBP12.72□□□□□ -0.37
CLN6-215ENST00000636674 CLDN17P56750 224 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 SMCO1Q147U7 214 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 TMEM176BQ3YBM2 270 aaPredicted RBP12.72□□□□□ -0.37
CLN6-215ENST00000636674 KDF1Q8NAX2 398 aaPredicted RBP12.72□□□□□ -0.37
CLN6-215ENST00000636674 UBAC2Q8NBM4 344 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 RXFP4Q8TDU9 374 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 MAFIPQ8WZ33 124 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 RASL10BQ96S79 203 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 S100A13Q99584 98 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 PRRX2Q99811 253 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 PLEKHA2Q9HB19 425 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 FBXL17Q9UF56 701 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 AMDHD2Q9Y303 409 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 USP34Q70CQ2 3546 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 A0A087WZY1 265 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 KNG1P01042 644 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 CRYBA1P05813 215 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 SPP1P10451 314 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 FCGR2AP12318 317 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 MYF5P13349 255 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 FAHP16930 419 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 KLK2P20151 261 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 NME2P22392 152 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 SFTPDP35247 375 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 HMGN3Q15651 99 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 OR2A2Q6IF42 318 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 ZNF574Q6ZN55 896 aaPredicted RBP12.72□□□□□ -0.37
CLN6-215ENST00000636674 DNASE2BQ8WZ79 361 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 ZNF2Q9BSG1 426 aaPredicted RBP12.72□□□□□ -0.37
CLN6-215ENST00000636674 EGLN1Q9GZT9 426 aa12.72□□□□□ -0.37
CLN6-215ENST00000636674 ZNF701Q9NV72 531 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms