RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 OR6X1Q8NH79 312 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 ZNF799Q96GE5 643 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 PIGQQ9BRB3 760 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 SLC26A1Q9H2B4 701 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 FPR2P25090 351 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 CYCSP99999 105 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 ZNF616Q08AN1 781 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 SPEM2Q0P670 501 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 PDZK1IP1Q13113 114 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 PIGYQ3MUY2 71 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 ZNF468Q5VIY5 522 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 ZNF774Q6NX45 483 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 PRSS54Q6PEW0 395 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 PPP1R3BQ86XI6 285 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 TMEM156Q8N614 296 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 OR5L1Q8NGL2 311 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 STOML3Q8TAV4 291 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 ASB13Q8WXK3 278 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 AKR1E2Q96JD6 320 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 PCDHGA1Q9Y5H4 931 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 ZFHX4Q86UP3 3567 aa12.28□□□□□ -0.44
CACNA1A-228ENST00000636610 A0A1W2PNV4 684 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 CSTBP04080 98 aaKnown RBP12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 LCATP04180 440 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 OR8U9P0C7N5 309 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 B4GALT1P15291 398 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 MSR1P21757 451 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 FAHD2BQ6P2I3 314 aaPredicted RBP12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 SLC30A7Q8NEW0 376 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 CADM4Q8NFZ8 388 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 OR8U1Q8NH10 309 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 MR1Q95460 341 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 FAHD2AQ96GK7 314 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 C2orf50Q96LR7 162 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 LPAR3Q9UBY5 353 aa12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 PTRH2Q9Y3E5 179 aaKnown RBP12.27□□□□□ -0.44
CACNA1A-228ENST00000636610 HSPB6O14558 160 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 TLX3O43711 291 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 CCNOP22674 350 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 ITGA3P26006 1051 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 FCGR2CP31995 323 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 VAX1Q5SQQ9 334 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 WDR74Q6RFH5 385 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 SPAG16Q8N0X2 631 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 SUMF1Q8NBK3 374 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 OR11L1Q8NGX0 322 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 SLC22A8Q8TCC7 542 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 ERGIC1Q969X5 290 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 PHF7Q9BWX1 381 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 ULBP2Q9BZM5 246 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 FBXL17Q9UF56 701 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 OSGIN2Q9Y236 505 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 CHCHD2Q9Y6H1 151 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 DSPP15924 2871 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 K7EPK0 472 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 FGF16O43320 207 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 SFTA3P0C7M3 94 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 SPP1P10451 314 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 CCL4P13236 92 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 RPS2P15880 293 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 ZNF708P17019 499 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 RPL12P30050 165 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 ENDOGQ14249 297 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 MEX3BQ6ZN04 569 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 FAM71E2Q8N5Q1 922 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 SECTM1Q8WVN6 248 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 ISOC2Q96AB3 205 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 OCSTAMPQ9BR26 566 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 SLC5A7Q9GZV3 580 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 RAB18Q9NP72 206 aa12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.27□□□□□ -0.45
CACNA1A-228ENST00000636610 AQP7P3A6NL99 342 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 F8VVB4 439 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 F8VWA3 439 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 MSTNO14793 375 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 CFIP05156 583 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 OR5H8P0DN80 308 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 RFC3P40938 356 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 SUMO3P55854 103 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 PIGPP57054 158 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 TMEM33P57088 247 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 HGFACQ04756 655 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 RSU1Q15404 277 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 Q6ZRG5 221 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 Q7L0L9 218 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 RABEPKQ7Z6M1 372 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 OR5T2Q8NGG2 359 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 FNDC9Q8TBE3 224 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 RCL1Q9Y2P8 373 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 AMDHD2Q9Y303 409 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 ESPL1Q14674 2120 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 GEMIN2O14893 280 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 IFNA2P01563 188 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 CRYBA1P05813 215 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 CD79AP11912 226 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 NTF4P34130 210 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 CEBPGP53567 150 aa12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 RPS18P62269 152 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-228ENST00000636610 ECH1Q13011 328 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms