RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TMEM211Q6ICI0 200 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 ETV7Q9Y603 341 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 U3KQ87 197 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 HTR1DP28221 377 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 LOXL3P58215 753 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 KCNE3Q9Y6H6 103 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 SHROOM3Q8TF72 1996 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 HELTA6NFD8 242 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 MGMTP16455 207 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 ALKAL1Q6UXT8 129 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 TBC1D26Q86UD7 250 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 MARC2Q969Z3 335 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 OR2A14Q96R47 310 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 ASCL3Q9NQ33 180 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 PMS2P2O95744 297 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 TIAL1Q01085 375 aaKnown RBP eCLIP15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 NCR3LG1Q68D85 454 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 ADIPOR1Q96A54 375 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 ERRFI1Q9UJM3 462 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 LPAR6P43657 344 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 HLXQ14774 488 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 OR2A2Q6IF42 318 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 OR10D3Q8NH80 312 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 EXTL1Q92935 676 aa15.98■□□□□ 0.15
CACNA1A-227ENST00000636549 TRAV39A0A0B4J263 110 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 A0A1B0GTQ1 180 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 FOXO1Q12778 655 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 FAM71E1Q6IPT2 247 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 NOL4LQ96MY1 436 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 S1PR5Q9H228 398 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 GPRIN2O60269 458 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 PTHLHP12272 177 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 RPL12P30050 165 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 TMEM116Q8NCL8 245 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 TRAPPC1Q9Y5R8 145 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 TMEM262E9PQX1 116 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 S100A11P31949 105 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 TEX261Q6UWH6 196 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 OR1F12Q8NHA8 337 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 TMEM204Q9BSN7 226 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 HLA-GP17693 338 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 ACAA2P42765 397 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 PSORS1C1Q9UIG5 152 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 R4GMQ9 66 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 TO15178 435 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 MPZL1O95297 269 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 ZNF137PP52743 207 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 SLC35D3Q5M8T2 416 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 SPEM1Q8N4L4 309 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 LAMP3Q9UQV4 416 aa15.97■□□□□ 0.15
CACNA1A-227ENST00000636549 IGHV3-72A0A0B4J1Y9 119 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 CLDN10P78369 228 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 LSAMPQ13449 338 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 FZD2Q14332 565 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 FAM219AQ8IW50 185 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 SLC39A13Q96H72 371 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 RER1O15258 196 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 CD3DP04234 171 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 RPL30P62888 115 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 PRSS41Q7RTY9 318 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 C5orf17Q8NAS9 161 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 TMEM56Q96MV1 263 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 PARD6AQ9NPB6 346 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 AMMECR1Q9Y4X0 333 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 ALPLP05186 524 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 SP1P08047 785 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 WNT5AP41221 380 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 KCNK15Q9H427 330 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 RAB1CQ92928 201 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 WDR61Q9GZS3 305 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 PIGMQ9H3S5 423 aa15.96■□□□□ 0.15
CACNA1A-227ENST00000636549 PF4P02776 101 aa15.96■□□□□ 0.14
CACNA1A-227ENST00000636549 COX5AP20674 150 aa15.96■□□□□ 0.14
CACNA1A-227ENST00000636549 PDZK1IP1Q13113 114 aa15.96■□□□□ 0.14
CACNA1A-227ENST00000636549 SAXO2Q658L1 398 aa15.96■□□□□ 0.14
CACNA1A-227ENST00000636549 SPACA9Q96E40 222 aaPredicted RBP15.96■□□□□ 0.14
CACNA1A-227ENST00000636549 A0A0A6YYJ9 748 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 ABLIM3O94929 683 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 PRSS1P07477 247 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 CYC1P08574 325 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 RAB7AP51149 207 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 ETFDHQ16134 617 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 PARP11Q9NR21 331 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 MBP02144 154 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 CTXN2P0C2S0 81 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 EMP1P54849 157 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 SNX22Q96L94 193 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 HTRA4P83105 476 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 HMGN3Q15651 99 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 ARIH2OSQ8N7S6 290 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 REPIN1Q9BWE0 567 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 ANKRD37Q7Z713 158 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 SIGLEC11Q96RL6 698 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 SRD5A3Q9H8P0 318 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 SEBOXQ9HB31 216 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 LRP6O75581 1613 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 H0YIG0 161 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 ATF1P18846 271 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 ANGPTL6Q8NI99 470 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 ZNF519Q8TB69 540 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms