RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 DMRTC1Q5HYR2 192 aa15.2■□□□□ 0.02
CLN6-214ENST00000636314 ZNF684Q5T5D7 378 aa15.2■□□□□ 0.02
CLN6-214ENST00000636314 BRD3OSQ6XYD6 125 aa15.2■□□□□ 0.02
CLN6-214ENST00000636314 OR5T2Q8NGG2 359 aa15.2■□□□□ 0.02
CLN6-214ENST00000636314 WDFY2Q96P53 400 aa15.2■□□□□ 0.02
CLN6-214ENST00000636314 DNTTIP1Q9H147 329 aa15.2■□□□□ 0.02
CLN6-214ENST00000636314 OR51I2Q9H344 312 aa15.2■□□□□ 0.02
CLN6-214ENST00000636314 RPUSD1Q9UJJ7 312 aaKnown RBP15.2■□□□□ 0.02
CLN6-214ENST00000636314 RHBDL1O75783 438 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 NRASP01111 189 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 MMP9P14780 707 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 ZIK1Q3SY52 487 aaPredicted RBP15.19■□□□□ 0.02
CLN6-214ENST00000636314 LRRC10Q5BKY1 277 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 CLVS2Q5SYC1 327 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 HAGHLQ6PII5 290 aaPredicted RBP15.19■□□□□ 0.02
CLN6-214ENST00000636314 FAM220AQ7Z4H9 259 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 FGFRL1Q8N441 504 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 TRUB1Q8WWH5 349 aaKnown RBP15.19■□□□□ 0.02
CLN6-214ENST00000636314 HRASLS5Q96KN8 279 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 TBX15Q96SF7 602 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 NLKQ9UBE8 527 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.19■□□□□ 0.02
CLN6-214ENST00000636314 SLC22A13Q9Y226 551 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 V9GYS6 101 aa15.19■□□□□ 0.02
CLN6-214ENST00000636314 A0A1B0GTI1 187 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 METTL15A6NJ78 407 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 SULT1C4O75897 302 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 BPIFB3P59826 476 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 ODF4Q2M2E3 257 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 ATPAF1Q5TC12 328 aaPredicted RBP15.18■□□□□ 0.02
CLN6-214ENST00000636314 CBR4Q8N4T8 237 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 OR14K1Q8NGZ2 314 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 ZNF671Q8TAW3 534 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 TMIGD2Q96BF3 282 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 SIRPDQ9H106 197 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 PLEKHA1Q9HB21 404 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 GPR173Q9NS66 373 aa15.18■□□□□ 0.02
CLN6-214ENST00000636314 SOX21Q9Y651 276 aaPredicted RBP15.18■□□□□ 0.02
CLN6-214ENST00000636314 A0A1B0GVI7 797 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 MDFIC2A0A1B0GVS7 189 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 OR2AT4A6NND4 320 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 DHRS7CA6NNS2 312 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 DLGAP1O14490 977 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 GPR37O15354 613 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 SELLP14151 372 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 AMY2BP19961 511 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 TGM4P49221 684 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 ARF6P62330 175 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 IL13RA1P78552 427 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 PDCD1Q15116 288 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 MIDNQ504T8 468 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 RUSC1-AS1Q66K80 236 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 ZNF788Q6ZQV5 615 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 CATSPERDQ86XM0 798 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 ANGPTL6Q8NI99 470 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 AQP3Q92482 292 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 H1FXQ92522 213 aaKnown RBP15.17■□□□□ 0.02
CLN6-214ENST00000636314 UBE2FQ969M7 185 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 SLC25A28Q96A46 364 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 MED30Q96HR3 178 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 C1orf147Q96MC9 270 aaPredicted RBP15.17■□□□□ 0.02
CLN6-214ENST00000636314 GAFA1Q96PS6 74 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 C9orf16Q9BUW7 83 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 CNTD2Q9H8S5 307 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 ONECUT1Q9UBC0 465 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 GNG8Q9UK08 70 aa15.17■□□□□ 0.02
CLN6-214ENST00000636314 ENTPD6O75354 484 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 TFF1P04155 84 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 CCL1P22362 96 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 HAAOP46952 286 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 GABRA2P47869 451 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 ACTC1P68032 377 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 ACTA1P68133 377 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 CDONQ4KMG0 1287 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 MEDAGQ5VYS4 303 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 TMEM42Q69YG0 159 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 ZNF573Q86YE8 665 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 GATAD2BQ8WXI9 593 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 RORBQ92753 470 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 LHX4Q969G2 390 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 ZDHHC16Q969W1 377 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 RNFT2Q96EX2 444 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 S100A14Q9HCY8 104 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 ACOXLQ9NUZ1 547 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 SLC25A10Q9UBX3 287 aaPredicted RBP15.16■□□□□ 0.02
CLN6-214ENST00000636314 KPTNQ9Y664 436 aa15.16■□□□□ 0.02
CLN6-214ENST00000636314 CENPVL3A0A0U1RRI6 287 aa15.15■□□□□ 0.02
CLN6-214ENST00000636314 A6NIN4 97 aa15.15■□□□□ 0.02
CLN6-214ENST00000636314 H3BSH0 61 aa15.15■□□□□ 0.02
CLN6-214ENST00000636314 CLDN34H7C241 214 aa15.15■□□□□ 0.02
CLN6-214ENST00000636314 J3QT63 122 aa15.15■□□□□ 0.02
CLN6-214ENST00000636314 SIGLEC5O15389 551 aa15.15■□□□□ 0.02
CLN6-214ENST00000636314 SYT7O43581 403 aa15.15■□□□□ 0.02
CLN6-214ENST00000636314 RNASE1P07998 156 aaKnown RBP15.15■□□□□ 0.02
CLN6-214ENST00000636314 SNRPGP62308 76 aaKnown RBP15.15■□□□□ 0.02
CLN6-214ENST00000636314 ZNF85Q03923 595 aa15.15■□□□□ 0.02
CLN6-214ENST00000636314 DGUOKQ16854 277 aa15.15■□□□□ 0.02
CLN6-214ENST00000636314 DEFB112Q30KQ8 113 aa15.15■□□□□ 0.02
CLN6-214ENST00000636314 SMIM21Q3B7S5 101 aa15.15■□□□□ 0.02
CLN6-214ENST00000636314 TP53I3Q53FA7 332 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms