RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 PAX5Q02548 391 aa14.38□□□□□ -0.11
CLN5-208ENST00000636183 SULT1A3P0DMM9 295 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 SULT1A4P0DMN0 295 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 CD82P27701 267 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 DDOSTP39656 456 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 RAB7AP51149 207 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 FAM3AP98173 230 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 FMODQ06828 376 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 FAAP20Q6NZ36 180 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 WDR61Q9GZS3 305 aaKnown RBP14.37□□□□□ -0.11
CLN5-208ENST00000636183 OR2D2Q9H210 308 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 MMP25Q9NPA2 562 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 LSM2Q9Y333 95 aaKnown RBP14.37□□□□□ -0.11
CLN5-208ENST00000636183 H7BYZ3 331 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 NOVP48745 357 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 ZNF658BQ4V348 819 aaPredicted RBP14.37□□□□□ -0.11
CLN5-208ENST00000636183 NCCRP1Q6ZVX7 275 aaPredicted RBP14.37□□□□□ -0.11
CLN5-208ENST00000636183 LRRTM1Q86UE6 522 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 GPX8Q8TED1 209 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 MRPS18BQ9Y676 258 aaKnown RBP14.37□□□□□ -0.11
CLN5-208ENST00000636183 ERVFC1-1P60608 527 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 CALHM3Q86XJ0 350 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 PTOV1Q86YD1 416 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 PXT1Q8NFP0 134 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 OR52I2Q8NH67 350 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 OR2A5Q96R48 311 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 TMPRSS13Q9BYE2 586 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 RCL1Q9Y2P8 373 aaKnown RBP14.37□□□□□ -0.11
CLN5-208ENST00000636183 SULT1C4O75897 302 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 AQP8O94778 261 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 WNT1P04628 370 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 RRASP10301 218 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 UNQ9370/PRO34162Q6UXP9 181 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 TCTE3Q8IZS6 198 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 VSIG4Q9Y279 399 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 HILPDAQ9Y5L2 63 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 TMEM200CA6NKL6 621 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 UBE2L6O14933 153 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 CCR9P51686 369 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 FA2HQ7L5A8 372 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 ORAI1Q96D31 301 aa14.37□□□□□ -0.11
CLN5-208ENST00000636183 C21orf140B9A014 251 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 C21orf58P58505 322 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 NKG7Q16617 165 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 PRSS41Q7RTY9 318 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 MCHR2Q969V1 340 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 PERPQ96FX8 193 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 MRGPRX3Q96LB0 322 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 YAE1D1Q9NRH1 226 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 INSIG2Q9Y5U4 225 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 SLX4Q8IY92 1834 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 ZNF727A8MUV8 499 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 RER1O15258 196 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 MARCH1Q8TCQ1 289 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 PDFQ9HBH1 243 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 IGHV3-21A0A0B4J1V1 117 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 SRD5A2P31213 254 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 SNRPNP63162 240 aaKnown RBP14.36□□□□□ -0.11
CLN5-208ENST00000636183 DGAT2L6Q6ZPD8 337 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 OR4S1Q8NGB4 309 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 ZNF486Q96H40 463 aaPredicted RBP14.36□□□□□ -0.11
CLN5-208ENST00000636183 C20orf27Q9GZN8 174 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 NUP98P52948 1817 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 MBP02144 154 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 FGF2P09038 288 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 RPL30P62888 115 aaKnown RBP14.36□□□□□ -0.11
CLN5-208ENST00000636183 GGNBP1Q5YKI7 109 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 OR52N4Q8NGI2 321 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 PHYHIPQ92561 330 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 ASCC3Q8N3C0 2202 aaKnown RBP14.36□□□□□ -0.11
CLN5-208ENST00000636183 CASP3P42574 277 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 TMEM231Q9H6L2 316 aa14.36□□□□□ -0.11
CLN5-208ENST00000636183 LIMK1P53667 647 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 C1orf185Q5T7R7 199 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 ABI3BPQ7Z7G0 1075 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 SLC38A6Q8IZM9 456 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 KIAA1958Q8N8K9 716 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 IGHV5-10-1A0A0J9YXX1 117 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 PPP5D1E7EU14 171 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 SEZ6L2Q6UXD5 910 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 CYSLTR2Q9NS75 346 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 PRDM4Q9UKN5 801 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 CHD2O14647 1828 aaKnown RBP14.35□□□□□ -0.11
CLN5-208ENST00000636183 RNASE1P07998 156 aaKnown RBP14.35□□□□□ -0.11
CLN5-208ENST00000636183 NTMQ9P121 344 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 G3V3Q6 166 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 ADRA2AP08913 450 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 FABP9Q0Z7S8 132 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 BTN1A1Q13410 526 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 ARHGDIGQ99819 225 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 AP5S1Q9NUS5 200 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 LRP12Q9Y561 859 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 TRDV1A0A1B0GX56 115 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 CEBPDP49716 269 aaPredicted RBP14.35□□□□□ -0.11
CLN5-208ENST00000636183 KCNK17Q96T54 332 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 PARP11Q9NR21 331 aa14.35□□□□□ -0.11
CLN5-208ENST00000636183 SPINK4O60575 86 aa14.34□□□□□ -0.11
CLN5-208ENST00000636183 PTGFRP43088 359 aa14.34□□□□□ -0.11
CLN5-208ENST00000636183 LPAR6P43657 344 aa14.34□□□□□ -0.11
CLN5-208ENST00000636183 UBE2MP61081 183 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms