RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	SRR	Q9GZT4	340 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	RAB33B	Q9H082	229 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	PARP12	Q9H0J9	701 aa	Known RBP	12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	DOCK10	Q96BY6	2186 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ZNF816-ZNF321P	A0A0X1KG74	233 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	LIPT2	A6NK58	231 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	NPIPB8	E9PQR5	432 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	HRH1	P35367	487 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	PLXDC2	Q6UX71	529 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	TFAP2E	Q6VUC0	442 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	GABRG1	Q8N1C3	465 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	RAB6A	P20340	208 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ACAA2	P42765	397 aa	Known RBP	12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	GZMM	P51124	257 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	RPL19	P84098	196 aa	Known RBP	12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	COL19A1	Q14993	1142 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ZNF574	Q6ZN55	896 aa	Predicted RBP	12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	TCTE3	Q8IZS6	198 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	FAM185A	Q8N0U4	392 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ZNF441	Q8N8Z8	693 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	MARCH1	Q8TCQ1	289 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	KCNK15	Q9H427	330 aa		12.69	□□□□□ -0.38
NEDD4L-238	ENST00000635997	C9orf172	C9J069	976 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	SHOX	O15266	292 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	SEMG1	P04279	462 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	CRYBA1	P05813	215 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	CTRB1	P17538	263 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	FCGR2C	P31995	323 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	SLC25A1	P53007	311 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	GNB2	P62879	340 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ACTBL2	Q562R1	376 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	CTRB2	Q6GPI1	263 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	WDR88	Q6ZMY6	472 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	OR51A2	Q8NGJ7	313 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	DDO	Q99489	341 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	SPACA1	Q9HBV2	294 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	KIF25	Q9UIL4	384 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	NKX6-3	A6NJ46	265 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	OR5H8	P0DN80	308 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	NFYA	P23511	347 aa	Predicted RBP	12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ZNF133	P52736	654 aa	Predicted RBP	12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	KHDC1L	Q5JSQ8	128 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	POFUT1	Q9H488	388 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	NECAP2	Q9NVZ3	263 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	SH2D1B	O14796	132 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	IL11	P20809	199 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	LRRTM1	Q86UE6	522 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	NPEPL1	Q8NDH3	523 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ZPLD1	Q8TCW7	415 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ZNF764	Q96H86	408 aa	Predicted RBP	12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	SLC25A21	Q9BQT8	299 aa	Predicted RBP	12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	TMEM100	Q9NV29	134 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997		A0A0J9YW62	118 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	KIR2DS1	A0A191URI9	304 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	C3orf80	F5H4A9	247 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	MSTN	O14793	375 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	FADS1	O60427	444 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	KIR2DS4	P43632	304 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	GK2	Q14410	553 aa	Predicted RBP	12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	KIR2DS1	Q14954	304 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	RNPS1	Q15287	305 aa	Known RBP	12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	TBR1	Q16650	682 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	OR8G2P	Q6IF36	304 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	SLC30A7	Q8NEW0	376 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	NANP	Q8TBE9	248 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	CCL17	Q92583	94 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	C1orf123	Q9NWV4	160 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	PRELID3B	Q9Y3B1	194 aa		12.68	□□□□□ -0.38
NEDD4L-238	ENST00000635997	GCM2	O75603	506 aa	Predicted RBP	12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	S100A2	P29034	98 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	KISS1	Q15726	138 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	HACD4	Q5VWC8	232 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	SEH1L	Q96EE3	360 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	FCRL1	Q96LA6	429 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ZNF391	Q9UJN7	358 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	PIK3IP1	Q96FE7	263 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	NMNAT2	Q9BZQ4	307 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ZNF230	Q9UIE0	474 aa	Predicted RBP	12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	PIGBOS1	A0A0B4J2F0	54 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997		A0A1W2PPV4	95 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	C1orf196	B1AJZ1	125 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	SLC17A2	O00624	439 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	T	O15178	435 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	HNF1A	P20823	631 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ZNF674	Q2M3X9	581 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	KRBOX4	Q5JUW0	171 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	OR2M3	Q8NG83	312 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	OR52N4	Q8NGI2	321 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	ISYNA1	Q9NPH2	558 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	EXOSC3	Q9NQT5	275 aa	Known RBP	12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	CYB5R1	Q9UHQ9	305 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	MRM2	Q9UI43	246 aa	Known RBP	12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	FLVCR1	Q9Y5Y0	555 aa		12.67	□□□□□ -0.38
NEDD4L-238	ENST00000635997	RALGAPA1	Q6GYQ0	2036 aa		12.66	□□□□□ -0.38
NEDD4L-238	ENST00000635997		A0A0A6YYJ9	748 aa		12.66	□□□□□ -0.38
NEDD4L-238	ENST00000635997	HOXD4	P09016	255 aa	Predicted RBP	12.66	□□□□□ -0.38
NEDD4L-238	ENST00000635997	FUT5	Q11128	374 aa		12.66	□□□□□ -0.38
NEDD4L-238	ENST00000635997	TMEM88	Q6PEY1	159 aa		12.66	□□□□□ -0.38
NEDD4L-238	ENST00000635997	FAM96B	Q9Y3D0	163 aa		12.66	□□□□□ -0.38

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