RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 ZNF806P0C7X5 589 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SP9P0CG40 484 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 CDAP32320 146 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 UCP3P55916 312 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 ARF1P84077 181 aaKnown RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 PLA2G7Q13093 441 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 TSC22D1Q15714 1073 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 OR5M1Q8NGP8 315 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 GTF3AQ92664 365 aaKnown RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 PECRQ9BY49 303 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 STRAPQ9Y3F4 350 aaKnown RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 RP1P56715 2156 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 IGKV3D-15A0A087WSY6 115 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 RAB19A4D1S5 217 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SRSF10O75494 262 aaKnown RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 CRYZL1O95825 349 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SP1P08047 785 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 HOXD4P09016 255 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 FAHP16930 419 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 DUSP1P28562 367 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 IAH1Q2TAA2 248 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 C16orf47Q6ZP98 133 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF318Q5VUA4 2279 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SLC22A20A6NK97 555 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 IFNA5P01569 189 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 OPN1LWP04000 364 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SERPINE2P07093 398 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 FOXK1P85037 733 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 FOXO1Q12778 655 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 FAM76BQ5HYJ3 339 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 ST8SIA2Q92186 375 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 GMPPAQ96IJ6 420 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 GSKIPQ9P0R6 139 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 LUZP4Q9P127 313 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 ANXA10Q9UJ72 324 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 PRELID1Q9Y255 219 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 LOC100509620A0A075B734 347 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 MFNGO00587 321 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 KNG1P01042 644 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 RRASP10301 218 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 B4GALT1P15291 398 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SRSF4Q08170 494 aaKnown RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 DMWDQ09019 674 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 HLXQ14774 488 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 MSMO1Q15800 293 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SPIN3Q5JUX0 258 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF529Q6P280 563 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 FBXW12Q6X9E4 464 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 CFAP77Q6ZQR2 320 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 ATOH1Q92858 354 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 RNF150Q9ULK6 438 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 BOLA1Q9Y3E2 137 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 TRGV5A0A0B4J1U4 118 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 A0A0B4J293 547 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 DFFBO76075 338 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 ZBTB25P24278 435 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 MPGP29372 298 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 OTX1P32242 354 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 KCNJ3P48549 501 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 GUCA2AQ02747 115 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SRSF7Q16629 238 aaKnown RBP eCLIP4□□□□□ -1.77
SCN1A-210ENST00000635776 OR13C8Q8NGS7 320 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 GFI1Q99684 422 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 GPR173Q9NS66 373 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 ST3GAL6Q9Y274 331 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 BTBD17A6NE02 478 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SOX15O60248 233 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 PMP2P02689 132 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 RPL23AP62750 156 aaKnown RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 GLCCI1Q86VQ1 547 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 OR5AS1Q8N127 324 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 OR5M9Q8NGP3 310 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 PPP1R1CQ8WVI7 109 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 RRNAD1Q96FB5 475 aaKnown RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 LRRC46Q96FV0 321 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF2Q9BSG1 426 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 RTN4RQ9BZR6 473 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 PKIBQ9C010 78 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 FOXD3Q9UJU5 478 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 TMEM210A6NLX4 147 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 CEACAM18A8MTB9 384 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 ZIC3O60481 467 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 CDS2O95674 445 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 CST4P01036 141 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 SSTR2P30874 369 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 EFNB2P52799 333 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 SRYQ05066 204 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF585AQ6P3V2 769 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 INO80CQ6PI98 192 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-210ENST00000635776 SVBPQ8N300 66 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 ZBTB34Q8NCN2 500 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 MARCH1Q8TCQ1 289 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 RTN4IP1Q8WWV3 396 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-210ENST00000635776 BCL2L14Q9BZR8 327 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 TNFSF18Q9UNG2 199 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 ERVH48-1M5A8F1 160 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 CRHP06850 196 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 GNB3P16520 340 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 SELENOPP49908 381 aa3.99□□□□□ -1.77
SCN1A-210ENST00000635776 MEOX1P50221 254 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms