RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 OR2M3Q8NG83 312 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 OR6T1Q8NGN1 323 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF671Q8TAW3 534 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 UBE2E3Q969T4 207 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 MAGOHBQ96A72 148 aaKnown RBP1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 RBM14Q96PK6 669 aaKnown RBP1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 OR5B2Q96R09 309 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 VGLL1Q99990 258 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 NIPSNAP3BQ9BS92 247 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 TM2D1Q9BX74 207 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 PKIBQ9C010 78 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 TRIM15Q9C019 465 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 GLIPR2Q9H4G4 154 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 IKZF5Q9H5V7 419 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 LRTM1Q9HBL6 345 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 LZTFL1Q9NQ48 299 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC17A5Q9NRA2 495 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 KLHL28Q9NXS3 571 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 SIGLEC8Q9NYZ4 499 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 IL36GQ9NZH8 169 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF581Q9P0T4 197 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 PRODH2Q9UF12 536 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 PCTPQ9UKL6 214 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 ABCG2Q9UNQ0 655 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 POLDIP2Q9Y2S7 368 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 ACOT9Q9Y305 439 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 PLLPQ9Y342 182 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 MOB4Q9Y3A3 225 aa1.89□□□□□ -2.11
SMARCB1-208ENST00000634926 IQANK1A0A1B0GTG1 560 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC22A20A6NK97 555 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF716A6NP11 495 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 SAP18O00422 153 aaKnown RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TP53I11O14683 189 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 EIF3HO15372 352 aaKnown RBP eCLIP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 PHF1O43189 567 aaPredicted RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TIMM8AO60220 97 aaPredicted RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 CBR3O75828 277 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC2A10O95528 541 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 IGKV1D-16P01601 117 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF735P0CB33 412 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 LAMP1P11279 417 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 ACADSP16219 412 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 IMPDH1P20839 514 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 AGTR1P30556 359 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 MAGEA8P43361 318 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 STARP49675 285 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 HNRNPA3P51991 378 aaKnown RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 EFNB2P52799 333 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 DIO3P55073 304 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 DSCR4P56555 118 aaPredicted RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 PLCXD2Q0VAA5 305 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 NAB1Q13506 487 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 PLPPR5Q32ZL2 321 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 GLYR1Q49A26 553 aaPredicted RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 KCTD21Q4G0X4 260 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TP53I3Q53FA7 332 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TRMT12Q53H54 448 aaKnown RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 BEX5Q5H9J7 111 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 NCMAPQ5T1S8 102 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 OR2A2Q6IF42 318 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 SCIMPQ6UWF3 145 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 ENPP6Q6UWR7 440 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TFAP2EQ6VUC0 442 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 GPRIN3Q6ZVF9 776 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 FRA10AC1Q70Z53 315 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 NANOGNBQ7Z5D8 188 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 GALNT10Q86SR1 603 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TPRA1Q86W33 373 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC22A9Q8IVM8 553 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 LRRC8AQ8IWT6 810 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 ZBED8Q8IZ13 594 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 OR2L13Q8N349 312 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC35F6Q8N357 371 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 GTPBP8Q8N3Z3 284 aaPredicted RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 KIR3DL3Q8N743 410 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 SNX31Q8N9S9 440 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 OR2T33Q8NG76 320 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 OR7G2Q8NG99 324 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 OR52R1Q8NGF1 315 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 OR1J4Q8NGS1 313 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 OR6K3Q8NGY3 331 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 FNDC9Q8TBE3 224 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 RAB3IL1Q8TBN0 382 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 STAG3L4Q8TBR4 150 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 VN1R17PQ8TDU5 208 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 DOK4Q8TEW6 326 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 KCTD4Q8WVF5 259 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TRUB1Q8WWH5 349 aaKnown RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF75CPQ92670 426 aaPredicted RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 RASL10AQ92737 203 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TOMM40LQ969M1 308 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 TMBIM1Q969X1 311 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 EFHD2Q96C19 240 aaPredicted RBP1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 PIK3IP1Q96FE7 263 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 FCRL1Q96LA6 429 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 COL21A1Q96P44 957 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC35A5Q9BS91 424 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 MED18Q9BUE0 208 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 SHCBP1LQ9BZQ2 653 aa1.88□□□□□ -2.11
SMARCB1-208ENST00000634926 METTL7AQ9H8H3 244 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms