RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 IGFBP7Q16270 282 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 ZNF485Q8NCK3 441 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 OR52B4Q8NGK2 314 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 BLNKQ8WV28 456 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 SEBOXQ9HB31 216 aaPredicted RBP10.53□□□□□ -0.72
SHPRH-211ENST00000629427 ZNF230Q9UIE0 474 aaPredicted RBP10.53□□□□□ -0.72
SHPRH-211ENST00000629427 DDOSTP39656 456 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 ZXDAP98168 799 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 TFF2Q03403 129 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 GABARAPL1Q9H0R8 117 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 OCEL1Q9H607 264 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 WNT16Q9UBV4 365 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 HMX2A2RU54 273 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 MS4A18H0YCH9 400 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 GP2P55259 537 aaKnown RBP10.53□□□□□ -0.72
SHPRH-211ENST00000629427 FUT7Q11130 342 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 SRSF5Q13243 272 aaKnown RBP10.53□□□□□ -0.72
SHPRH-211ENST00000629427 MS4A18Q3C1V0 323 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 OR10D3Q8NH80 312 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 DERL3Q96Q80 235 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 CDCA4Q9BXL8 241 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 FOXJ3Q9UPW0 622 aa10.53□□□□□ -0.72
SHPRH-211ENST00000629427 DICER1Q9UPY3 1922 aaKnown RBP10.52□□□□□ -0.72
SHPRH-211ENST00000629427 SCN7AQ01118 1682 aa10.52□□□□□ -0.72
SHPRH-211ENST00000629427 CST7O76096 145 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 IGHV3-13P01766 116 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 IGHV3-7P01780 117 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 SUMO1P63165 101 aaKnown RBP10.52□□□□□ -0.73
SHPRH-211ENST00000629427 PNLIPRP3Q17RR3 467 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 ZNF586Q9NXT0 402 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 KCNE3Q9Y6H6 103 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 SERPINE3A8MV23 424 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 CYR61O00622 381 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 GUCA2AQ02747 115 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 ZNF260Q3ZCT1 412 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 FAM162BQ5T6X4 162 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 SPNS3Q6ZMD2 512 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 MCHR2Q969V1 340 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 DOK1Q99704 481 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 PECRQ9BY49 303 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 AUNIPQ9H7T9 357 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 DCAF16Q9NXF7 216 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 EPHA2P29317 976 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 DCTDP32321 178 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 SOX8P57073 446 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 GPNMBQ14956 572 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 FFAR4Q5NUL3 377 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 TP53I13Q8NBR0 393 aaPredicted RBP10.52□□□□□ -0.73
SHPRH-211ENST00000629427 OR4F17Q8NGA8 305 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 FKBP11Q9NYL4 201 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 POMT1Q9Y6A1 747 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 A0A1W2PRD5 423 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 A0A1W2PRF3 423 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 A0A1W2PRM7 423 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 FAM157AC9JC47 383 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 M0R296 226 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 TMPRSS2O15393 492 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 SCGB1C2P0DMR2 95 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 FUT3P21217 361 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 PPP1R1CQ8WVI7 109 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 ANKRD34CP0C6C1 535 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 OR2B8PP59922 312 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 FAM27D1Q5T7N8 215 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 ETFRF1Q6IPR1 90 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 C20orf196Q8IYI0 205 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 OR5D13Q8NGL4 314 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 SERGEFQ9UGK8 458 aa10.52□□□□□ -0.73
SHPRH-211ENST00000629427 MAMSTRQ6ZN01 415 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 CALHM3Q86XJ0 350 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 SFTPA2Q8IWL1 248 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 SFTPA1Q8IWL2 248 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 GPR87Q9BY21 358 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 IL36GQ9NZH8 169 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 SLC25A5P05141 298 aaKnown RBP10.51□□□□□ -0.73
SHPRH-211ENST00000629427 SPINK9Q5DT21 86 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 WDR61Q9GZS3 305 aaKnown RBP10.51□□□□□ -0.73
SHPRH-211ENST00000629427 PCED1AQ9H1Q7 454 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 YTHDF2Q9Y5A9 579 aaKnown RBP10.51□□□□□ -0.73
SHPRH-211ENST00000629427 KRTDAPP60985 99 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 PAX5Q02548 391 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 SP6Q3SY56 376 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 FA2HQ7L5A8 372 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 OR4C16Q8NGL9 310 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 OTOSQ8NHW6 89 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 KLK11Q9UBX7 282 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 PSG11Q9UQ72 335 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 ARRDC5A6NEK1 342 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 C1QBP02746 253 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 EPXP11678 715 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 TGFBR1P36897 503 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 LIMK1P53667 647 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 KISS1Q15726 138 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 RFESDQ8TAC1 157 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 SPNS1Q9H2V7 528 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 COL11A1P12107 1806 aaPredicted RBP10.51□□□□□ -0.73
SHPRH-211ENST00000629427 IGHV1OR15-9A0A0B4J2B8 117 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 TRBV5-4A0A0C4DH59 114 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 CPN1P15169 458 aa10.51□□□□□ -0.73
SHPRH-211ENST00000629427 EVX1P49640 407 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms