RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 OR10V1Q8NGI7 309 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 PINX1Q96BK5 328 aaKnown RBP8.18□□□□□ -1.1
GGA3-223ENST00000621870 KLK11Q9UBX7 282 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 PRR33A8MZF0 331 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 RAB6AP20340 208 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 COX7A1P24310 79 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 S100PP25815 95 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 RAB13P51153 203 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 UBE2MP61081 183 aaKnown RBP8.18□□□□□ -1.1
GGA3-223ENST00000621870 RRAS2P62070 204 aaPredicted RBP8.18□□□□□ -1.1
GGA3-223ENST00000621870 NUFIP2Q7Z417 695 aaKnown RBP8.18□□□□□ -1.1
GGA3-223ENST00000621870 ZNF441Q8N8Z8 693 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 MARCH1Q8TCQ1 289 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 ASB10Q8WXI3 467 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 PTP4A1Q93096 173 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 HRH4Q9H3N8 390 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 SAP30LQ9HAJ7 183 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 GNB4Q9HAV0 340 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 GPR35Q9HC97 309 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 SLC7A10Q9NS82 523 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 DNAH12Q6ZR08 3092 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 POM121CA8CG34 1229 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 ZNHIT1O43257 154 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 MED6O75586 246 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 UPK3AO75631 287 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 IGLV3-19P01714 112 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 DCTDP32321 178 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 SERPINF1P36955 418 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 PTGFRP43088 359 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 NKX2-1P43699 371 aaPredicted RBP8.18□□□□□ -1.1
GGA3-223ENST00000621870 EVX1P49640 407 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 TAS2R30P59541 319 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 ZNF528Q3MIS6 628 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 ZNF626Q68DY1 528 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 NPEPL1Q8NDH3 523 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 PAQR8Q8TEZ7 354 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 LPAR2Q9HBW0 351 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 ICAM5Q9UMF0 924 aa8.18□□□□□ -1.1
GGA3-223ENST00000621870 MYO16Q9Y6X6 1858 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 THADAQ6YHU6 1953 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 ACSM4P0C7M7 580 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 ACP1P24666 158 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 GSK3AP49840 483 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 GNG10P50151 68 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 PLA2G7Q13093 441 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 CD300LDQ6UXZ3 194 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 MAMSTRQ6ZN01 415 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 FAM214BQ7L5A3 538 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 GLCCI1Q86VQ1 547 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 OR10AC1Q8NH08 325 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 ZNF251Q9BRH9 671 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 AUNIPQ9H7T9 357 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 DEFB108AA8MXU0 73 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 CDIPTO14735 213 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 TSPAN2O60636 221 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 PMS2P2O95744 297 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 ETV6P41212 452 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 GUCA2AQ02747 115 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 RTL8BQ17RB0 113 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 SPANXN5Q5MJ07 72 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 PPP1R32Q7Z5V6 425 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 CDC20BQ86Y33 519 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 WDSUB1Q8N9V3 476 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 OR52N4Q8NGI2 321 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 SLC39A7Q92504 469 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 PIK3IP1Q96FE7 263 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 C20orf85Q9H1P6 137 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 MYOZ1Q9NP98 299 aaPredicted RBP8.17□□□□□ -1.1
GGA3-223ENST00000621870 F8W036 122 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 TMPRSS2O15393 492 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 ST8SIA3O43173 380 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 CLEC3BP05452 202 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 RPS2P15880 293 aaKnown RBP8.17□□□□□ -1.1
GGA3-223ENST00000621870 SRP14P37108 136 aaKnown RBP8.17□□□□□ -1.1
GGA3-223ENST00000621870 LSM6P62312 80 aaKnown RBP8.17□□□□□ -1.1
GGA3-223ENST00000621870 BLOC1S1P78537 153 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 RTP5Q14D33 572 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 TMEM268Q5VZI3 342 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 CREB3L2Q70SY1 520 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 Q8IYB0 196 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 OR4S1Q8NGB4 309 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 OR8B12Q8NGG6 310 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 TMEM171Q8WVE6 324 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 RTN4IP1Q8WWV3 396 aaPredicted RBP8.17□□□□□ -1.1
GGA3-223ENST00000621870 GMPPAQ96IJ6 420 aaPredicted RBP8.17□□□□□ -1.1
GGA3-223ENST00000621870 FCRL1Q96LA6 429 aa8.17□□□□□ -1.1
GGA3-223ENST00000621870 UNKLQ9H9P5 680 aaKnown RBP8.17□□□□□ -1.1
GGA3-223ENST00000621870 TMEM30CPA0ZSE6 113 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 NCBP2LA6PVI3 153 aaKnown RBP8.16□□□□□ -1.1
GGA3-223ENST00000621870 C17orf51A8MQB3 221 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 M0R1X1 148 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 FABP7O15540 132 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 SEMG1P04279 462 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 CYC1P08574 325 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 COX6A1P12074 109 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 ECI1P42126 302 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 PCOLCEQ15113 449 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 KRTCAP3Q53RY4 240 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 ALKAL2Q6UX46 152 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 LRRTM1Q86UE6 522 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms