RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PARP16Q8N5Y8 322 aa11.99□□□□□ -0.49
CBWD3-217ENST00000621474 OR11L1Q8NGX0 322 aa11.99□□□□□ -0.49
CBWD3-217ENST00000621474 TRMT10AQ8TBZ6 339 aaKnown RBP11.99□□□□□ -0.49
CBWD3-217ENST00000621474 NPRL2Q8WTW4 380 aa11.99□□□□□ -0.49
CBWD3-217ENST00000621474 AQP3Q92482 292 aa11.99□□□□□ -0.49
CBWD3-217ENST00000621474 HPS1Q92902 700 aa11.99□□□□□ -0.49
CBWD3-217ENST00000621474 MSI2Q96DH6 328 aaKnown RBP11.99□□□□□ -0.49
CBWD3-217ENST00000621474 SEH1LQ96EE3 360 aa11.99□□□□□ -0.49
CBWD3-217ENST00000621474 HIST1H2AAQ96QV6 131 aa11.99□□□□□ -0.49
CBWD3-217ENST00000621474 PPIAL4EA0A075B759 164 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 hCG_1807616A0A1W2PRN6 198 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 ISPDA4D126 451 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 PPIAL4DF5H284 164 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 PPIAL4FP0DN26 164 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 CELP19835 753 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 CD80P33681 288 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 HAAOP46952 286 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 TAS2R43P59537 309 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 BDH1Q02338 343 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 SPHARQ15513 63 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 SFRP4Q6FHJ7 346 aaPredicted RBP11.98□□□□□ -0.49
CBWD3-217ENST00000621474 RNF144BQ7Z419 303 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 LRRC29Q8WV35 223 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 GAL3ST1Q99999 423 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 TMEM246Q9BRR3 403 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 ZNF665Q9H7R5 613 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 ZNF281Q9Y2X9 895 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 PPIAL4AQ9Y536 164 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 HIVEP2P31629 2446 aa11.98□□□□□ -0.49
CBWD3-217ENST00000621474 TRBV5-5A0A0J9YX44 114 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 CEACAM18A8MTB9 384 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 TNFRSF13BO14836 293 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 CD5LO43866 347 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 GATBO75879 557 aaKnown RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 CD1AP06126 327 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 IRF2P14316 349 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 MPZP25189 248 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 MAP2K4P45985 399 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 GABARAPL2P60520 117 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 SEC61A1P61619 476 aaKnown RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 MED22Q15528 200 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 TEX36Q5VZQ5 186 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 ZNF529Q6P280 563 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 HAGHLQ6PII5 290 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 CLEC9AQ6UXN8 241 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 Q71RC1 249 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 GPR148Q8TDV2 347 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 TECTBQ96PL2 329 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 WDR13Q9H1Z4 485 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 BLOC1S6Q9UL45 172 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 DHDHQ9UQ10 334 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 F5H0A9 414 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 AKR7A2O43488 359 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 SYNGR1O43759 233 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 HEXAP06865 529 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 ZNF16P17020 682 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 ZNF20P17024 532 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 ATF1P18846 271 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 EEF1B2P24534 225 aaKnown RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 SOX2P48431 317 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 TBCEQ15813 527 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 YIF1BQ5BJH7 314 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 ANGPTL5Q86XS5 388 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 FAM90A1Q86YD7 464 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 BOLLQ8N9W6 283 aaKnown RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 OR13C9Q8NGT0 318 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 OR10Z1Q8NGY1 313 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 TSEN15Q8WW01 171 aaKnown RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 TMEM106AQ96A25 262 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 ORAI1Q96D31 301 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 CCDC90BQ9GZT6 254 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 PATZ1Q9HBE1 687 aaKnown RBP11.97□□□□□ -0.49
CBWD3-217ENST00000621474 LRRC42Q9Y546 428 aa11.97□□□□□ -0.49
CBWD3-217ENST00000621474 FAM230AA0A1W2PPH8 454 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 OOEPA6NGQ2 149 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 LGALS8O00214 317 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 FCN3O75636 299 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 SERPINA3P01011 423 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 RPSAP08865 295 aaKnown RBP11.96□□□□□ -0.5
CBWD3-217ENST00000621474 OCM2P0CE71 109 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 AZGP1P25311 298 aaKnown RBP11.96□□□□□ -0.5
CBWD3-217ENST00000621474 FUT6P51993 359 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 EMX1Q04741 257 aaPredicted RBP11.96□□□□□ -0.5
CBWD3-217ENST00000621474 LYPD2Q6UXB3 125 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 SERPINA12Q8IW75 414 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 MUC20Q8N307 709 aaPredicted RBP11.96□□□□□ -0.5
CBWD3-217ENST00000621474 SPICQ8N5J4 248 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 DNAAF1Q8NEP3 725 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 DEFB108BQ8NET1 73 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 OR51A2Q8NGJ7 313 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 ZCCHC4Q9H5U6 513 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 ACOT13Q9NPJ3 140 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 CTSZQ9UBR2 303 aa11.96□□□□□ -0.5
CBWD3-217ENST00000621474 IGHV3OR15-7A0A075B7D8 119 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 J3QT63 122 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 ALX3O95076 343 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 WNT2P09544 360 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 AMY2BP19961 511 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 PCMT1P22061 227 aa11.95□□□□□ -0.5
CBWD3-217ENST00000621474 ZFP36P26651 326 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms