RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 RNF212Q495C1 297 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 KHDC1LQ5JSQ8 128 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 C1orf140Q5VVS0 124 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 CATSPERDQ86XM0 798 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 SGPP2Q8IWX5 399 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 KDM8Q8N371 416 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ARRDC1Q8N5I2 433 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 WDSUB1Q8N9V3 476 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 SUMF1Q8NBK3 374 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 DEFB124Q8NES8 71 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 OR56B1Q8NGI3 324 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 MFSD8Q8NHS3 518 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 SNIP1Q8TAD8 396 aaKnown RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 PTX4Q96A99 478 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 KIRREL1Q96J84 757 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 C2orf50Q96LR7 162 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 PRDM14Q9GZV8 571 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 CNTD2Q9H8S5 307 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 CHODLQ9H9P2 273 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 KCNIP3Q9Y2W7 256 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ALPK2Q86TB3 2170 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 IGLV3-12A0A075B6K2 115 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 NPIPB9F8W1W9 429 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 WRBO00258 174 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ADAP1O75689 374 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 EIF3GO75821 320 aaKnown RBP eCLIP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ZFAND5O76080 213 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 JTBO76095 146 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 MUC1P15941 1255 aaPredicted RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 FOLR3P41439 243 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 PNLIPRP2P54317 469 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 SKP2Q13309 424 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 SLC22A6Q4U2R8 563 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 CDCP2Q5VXM1 449 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ADAM5Q6NVV9 412 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 GLIPR1L1Q6UWM5 242 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 DRAM2Q6UX65 266 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ABHD12BQ7Z5M8 362 aaPredicted RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF565Q8N9K5 539 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 OR4D6Q8NGJ1 314 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 OR51T1Q8NGJ9 327 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 OR5L2Q8NGL0 311 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 NUBPLQ8TB37 319 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 C1orf123Q9NWV4 160 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 SLC5A6Q9Y289 635 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 KLF2Q9Y5W3 355 aaPredicted RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 B4E171 279 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 EFSO43281 561 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 OIP5O43482 229 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ICOSLGO75144 302 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 SFT2D2O95562 160 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 MT-ND4LP03901 98 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 TSPAN7P41732 249 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 RAB5CP51148 216 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 DVL1P1P54792 670 aaPredicted RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 POU3F1Q03052 451 aaPredicted RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 TLE3Q04726 772 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 FABP9Q0Z7S8 132 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 RAB32Q13637 225 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 RHEBQ15382 184 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 MICBQ29980 383 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 EXOSC6Q5RKV6 272 aaKnown RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 HES3Q5TGS1 186 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 UNQ6494/PRO21346Q6UXR6 183 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 OR9K2Q8NGE7 335 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ADIPOR1Q96A54 375 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 FAM71F1Q96KD3 344 aaPredicted RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 RCC2Q9P258 522 aaKnown RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 DNAJB11Q9UBS4 358 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 PMS2P1A4D2B8 440 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 FGF16O43320 207 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 CLPSP04118 112 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 HLA-GP17693 338 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 SLC26A5P58743 744 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 ROM1Q03395 351 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 PNLIPRP3Q17RR3 467 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF260Q3ZCT1 412 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF385CQ66K41 422 aaPredicted RBP6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF529Q6P280 563 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 OPN5Q6U736 354 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF283Q8N7M2 679 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 C20orf24Q9BUV8 137 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 PARP12Q9H0J9 701 aaKnown RBP6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 FN3KRPQ9HA64 309 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 COA4Q9NYJ1 87 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 SPTBN2O15020 2390 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 MUC6Q6W4X9 2439 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 A0A1B0GV50 99 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 VSTM2BA6NLU5 285 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 CST4P01036 141 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF735P0CB33 412 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF44P15621 663 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 RPL12P30050 165 aaKnown RBP6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 RPS18P62269 152 aaKnown RBP6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 C1QL3Q5VWW1 255 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 RPL7L1Q6DKI1 246 aaKnown RBP6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 LRRC75AQ8NAA5 344 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 OR52N4Q8NGI2 321 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 LIPHQ8WWY8 451 aa6.17□□□□□ -1.42
SRGAP3-213ENST00000618999 AQP3Q92482 292 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms