RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 KIRREL1Q96J84 757 aa17.88■□□□□ 0.45
NEK3-208ENST00000618534 TM2D1Q9BX74 207 aa17.88■□□□□ 0.45
NEK3-208ENST00000618534 ZNF160Q9HCG1 818 aa17.88■□□□□ 0.45
NEK3-208ENST00000618534 LSM5Q9Y4Y9 91 aaKnown RBP17.88■□□□□ 0.45
NEK3-208ENST00000618534 SDK1Q7Z5N4 2213 aa17.88■□□□□ 0.45
NEK3-208ENST00000618534 PRUNE2Q8WUY3 3088 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 CLDN17P56750 224 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 RSPO4Q2I0M5 234 aaPredicted RBP17.87■□□□□ 0.45
NEK3-208ENST00000618534 NKAIN1Q4KMZ8 207 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 KMT5CQ86Y97 462 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 SULF2Q8IWU5 870 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 MRPL24Q96A35 216 aaKnown RBP17.87■□□□□ 0.45
NEK3-208ENST00000618534 AKR1E2Q96JD6 320 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 PARP12Q9H0J9 701 aaKnown RBP17.87■□□□□ 0.45
NEK3-208ENST00000618534 IFT22Q9H7X7 185 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 LMAN1LQ9HAT1 526 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 AMDHD2Q9Y303 409 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 CPT2P23786 658 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 GABRR1P24046 479 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 TMEM33P57088 247 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 S100A13Q99584 98 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 PRRX2Q99811 253 aa17.87■□□□□ 0.45
NEK3-208ENST00000618534 OR5H15A6NDH6 313 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 AQP7P3A6NL99 342 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 MSTNO14793 375 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 DHRS3O75911 302 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 AKR1C3P42330 323 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 DVL1P1P54792 670 aaPredicted RBP17.86■□□□□ 0.45
NEK3-208ENST00000618534 SMCO1Q147U7 214 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 GGNBP1Q5YKI7 109 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 SLC16A14Q7RTX9 510 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 SGPP2Q8IWX5 399 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 MYOTQ9UBF9 498 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 TUBD1Q9UJT1 453 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 B3GALT1Q9Y5Z6 326 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 V9GYS6 101 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 JTBO76095 146 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 SCGB1D2O95969 90 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 GAPDHP04406 335 aaKnown RBP17.86■□□□□ 0.45
NEK3-208ENST00000618534 CTSSP25774 331 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 EIF3IQ13347 325 aaKnown RBP17.86■□□□□ 0.45
NEK3-208ENST00000618534 HABP2Q14520 560 aaPredicted RBP17.86■□□□□ 0.45
NEK3-208ENST00000618534 LCN10Q6JVE6 187 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 CLEC9AQ6UXN8 241 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 OR5L2Q8NGL0 311 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 SECTM1Q8WVN6 248 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 CLCC1Q96S66 551 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 RNF122Q9H9V4 155 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 SMCO4Q9NRQ5 59 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 CACFD1Q9UGQ2 172 aa17.86■□□□□ 0.45
NEK3-208ENST00000618534 CRYM-AS1A6NIL9 109 aa17.85■□□□□ 0.45
NEK3-208ENST00000618534 IFNA4P05014 189 aa17.85■□□□□ 0.45
NEK3-208ENST00000618534 CTSDP07339 412 aaPredicted RBP17.85■□□□□ 0.45
NEK3-208ENST00000618534 SLC25A45Q8N413 288 aa17.85■□□□□ 0.45
NEK3-208ENST00000618534 ERGIC1Q969X5 290 aa17.85■□□□□ 0.45
NEK3-208ENST00000618534 C14orf79Q96F83 325 aa17.85■□□□□ 0.45
NEK3-208ENST00000618534 CRB3Q9BUF7 120 aa17.85■□□□□ 0.45
NEK3-208ENST00000618534 CHST5Q9GZS9 411 aa17.85■□□□□ 0.45
NEK3-208ENST00000618534 PLEKHJ1Q9NW61 149 aa17.85■□□□□ 0.45
NEK3-208ENST00000618534 PIGLQ9Y2B2 252 aa17.85■□□□□ 0.45
NEK3-208ENST00000618534 CABIN1Q9Y6J0 2220 aa17.85■□□□□ 0.45
NEK3-208ENST00000618534 PPT1P50897 306 aa17.84■□□□□ 0.45
NEK3-208ENST00000618534 SWI5Q1ZZU3 235 aa17.84■□□□□ 0.45
NEK3-208ENST00000618534 PHYHD1Q5SRE7 291 aa17.84■□□□□ 0.45
NEK3-208ENST00000618534 OPN5Q6U736 354 aa17.84■□□□□ 0.45
NEK3-208ENST00000618534 HAS2Q92819 552 aa17.84■□□□□ 0.45
NEK3-208ENST00000618534 ATPIF1Q9UII2 106 aa17.84■□□□□ 0.45
NEK3-208ENST00000618534 POMT1Q9Y6A1 747 aa17.84■□□□□ 0.45
NEK3-208ENST00000618534 RRP8O43159 456 aaKnown RBP17.84■□□□□ 0.45
NEK3-208ENST00000618534 MSR1P21757 451 aa17.84■□□□□ 0.45
NEK3-208ENST00000618534 WDR74Q6RFH5 385 aaPredicted RBP17.84■□□□□ 0.45
NEK3-208ENST00000618534 RABEPKQ7Z6M1 372 aa17.84■□□□□ 0.45
NEK3-208ENST00000618534 BSCL2Q96G97 398 aaPredicted RBP17.84■□□□□ 0.45
NEK3-208ENST00000618534 LIME1Q9H400 295 aa17.84■□□□□ 0.45
NEK3-208ENST00000618534 A0A0U1RQV5 110 aa17.83■□□□□ 0.45
NEK3-208ENST00000618534 CA11O75493 328 aa17.83■□□□□ 0.45
NEK3-208ENST00000618534 EIF3GO75821 320 aaKnown RBP eCLIP17.83■□□□□ 0.45
NEK3-208ENST00000618534 ZFAND5O76080 213 aa17.83■□□□□ 0.45
NEK3-208ENST00000618534 IFNA21P01568 189 aa17.83■□□□□ 0.45
NEK3-208ENST00000618534 FOLR2P14207 255 aa17.83■□□□□ 0.45
NEK3-208ENST00000618534 LSM6P62312 80 aaKnown RBP17.83■□□□□ 0.45
NEK3-208ENST00000618534 ENDOGQ14249 297 aaKnown RBP17.83■□□□□ 0.45
NEK3-208ENST00000618534 RSPO1Q2MKA7 263 aaPredicted RBP17.83■□□□□ 0.45
NEK3-208ENST00000618534 LRRC18Q8N456 261 aa17.83■□□□□ 0.45
NEK3-208ENST00000618534 WDSUB1Q8N9V3 476 aa17.83■□□□□ 0.45
NEK3-208ENST00000618534 OR9K2Q8NGE7 335 aa17.83■□□□□ 0.45
NEK3-208ENST00000618534 PP6455Q8WZ26 134 aa17.83■□□□□ 0.45
NEK3-208ENST00000618534 PADI1Q9ULC6 663 aa17.83■□□□□ 0.45
NEK3-208ENST00000618534 ASCC3Q8N3C0 2202 aaKnown RBP17.83■□□□□ 0.45
NEK3-208ENST00000618534 TLX3O43711 291 aaPredicted RBP17.83■□□□□ 0.44
NEK3-208ENST00000618534 APOC1P02654 83 aa17.83■□□□□ 0.44
NEK3-208ENST00000618534 ECI1P42126 302 aa17.83■□□□□ 0.44
NEK3-208ENST00000618534 ARL6IP1Q15041 203 aa17.83■□□□□ 0.44
NEK3-208ENST00000618534 ZNF239Q16600 458 aaKnown RBP17.83■□□□□ 0.44
NEK3-208ENST00000618534 PRAMEF20Q5VT98 475 aa17.83■□□□□ 0.44
NEK3-208ENST00000618534 CPEB2Q7Z5Q1 589 aaKnown RBP17.83■□□□□ 0.44
NEK3-208ENST00000618534 CADM4Q8NFZ8 388 aa17.83■□□□□ 0.44
NEK3-208ENST00000618534 LYPD6BQ8NI32 183 aa17.83■□□□□ 0.44
NEK3-208ENST00000618534 TIMM10BQ9Y5J6 103 aa17.83■□□□□ 0.44
NEK3-208ENST00000618534 ZNF205O95201 554 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms