RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 CSN2P05814 226 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 CD1AP06126 327 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 CHRM2P08172 466 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 ZNF705DP0CH99 300 aaPredicted RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 ZNF705BP0CI00 300 aaPredicted RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 LIMS3P0CW19 117 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 LIMS4P0CW20 117 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 AKAIN1P0CW23 69 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 PGA4P0DJD7 388 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 PGA5P0DJD9 388 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 PSG1P11464 419 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 AKR1C4P17516 323 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 RPS4Y1P22090 263 aaKnown RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 CD34P28906 385 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 SRD5A2P31213 254 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 OTX2P32243 289 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 OR1D2P34982 312 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 SREBF1P36956 1147 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 MPLP40238 635 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 PPICP45877 212 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 XCR1P46094 333 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 CX3CR1P49238 355 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 THBS3P49746 956 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 P2RX1P51575 399 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 HMGCS2P54868 508 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 FOXA1P55317 472 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 GFRA1P56159 465 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 PIGPP57054 158 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 S100A10P60903 97 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 RPL23AP62750 156 aaKnown RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 PAFAH1B2P68402 229 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 ZXDBP98169 803 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 ID2Q02363 134 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 EGR4Q05215 589 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 FOXF1Q12946 379 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 ENDOGQ14249 297 aaKnown RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 GPNMBQ14956 572 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 ACKR1Q16570 336 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 MEP1BQ16820 701 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMC5-204ENST00000618375 CEACAM21Q3KPI0 293 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 ARHGAP11BQ3KRB8 267 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 CTXN3Q4LDR2 81 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 TRMT12Q53H54 448 aaKnown RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 SYT14P1Q58G82 188 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 ALG10Q5BKT4 473 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 ACTL10Q5JWF8 245 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 PRR31Q5SQ13 230 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 PHF19Q5T6S3 580 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 RAET1LQ5VY80 246 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 TMEM42Q69YG0 159 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 NCBP2-AS2Q69YL0 99 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 TRAT1Q6PIZ9 186 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 PAQR6Q6TCH4 344 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 UNQ6126/PRO20091Q6UXV3 157 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 LHFPL2Q6ZUX7 228 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 C17orf64Q86WR6 236 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 KLHDC8AQ8IYD2 350 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 DND1Q8IYX4 353 aaKnown RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 ZNF101Q8IZC7 436 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 LGI3Q8N145 548 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 CFAP52Q8N1V2 620 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 Q8N1Y9 231 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 NXPE1Q8N323 547 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 GPD1LQ8N335 351 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 LINC00471Q8N535 108 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 PNPLA1Q8N8W4 532 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 FER1L6-AS1Q8NA97 138 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 GATSQ8NAP1 163 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 OR4K1Q8NGD4 311 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 OR10X1Q8NGY0 326 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 OR52I2Q8NH67 350 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 SKA2Q8WVK7 121 aaPredicted RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 LENG9Q96B70 501 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 APH1AQ96BI3 265 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 MOAP1Q96BY2 351 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 DDIT4LQ96D03 193 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 SLAMF6Q96DU3 332 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 TVP23CQ96ET8 276 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 ZNF582Q96NG8 517 aaPredicted RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 ZFP3Q96NJ6 502 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 LRRC3BQ96PB8 259 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 SIGLEC12Q96PQ1 595 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 ARHGDIGQ99819 225 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 GABRG3Q99928 467 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 CHRDL1Q9BU40 450 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 SNRNP25Q9BV90 132 aaKnown RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 LINC00470Q9BZP3 86 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 DPY30Q9C005 99 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 CIPCQ9C0C6 399 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 SLC5A7Q9GZV3 580 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 FAM124BQ9H5Z6 455 aaPredicted RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 ZDHHC6Q9H6R6 413 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 RPF1Q9H9Y2 349 aaKnown RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 TBC1D17Q9HA65 648 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 PATZ1Q9HBE1 687 aaKnown RBP3.09□□□□□ -1.91
SMC5-204ENST00000618375 NGBQ9NPG2 151 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 TMEM9BQ9NQ34 198 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 INPP5EQ9NRR6 644 aa3.09□□□□□ -1.91
SMC5-204ENST00000618375 SLC7A10Q9NS82 523 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms