RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 STEAP2Q8NFT2 490 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 CPT1CQ8TCG5 803 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 ADAMTS17Q8TE56 1095 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 PIGCQ92535 297 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 SLC25A21Q9BQT8 299 aaPredicted RBP10.81□□□□□ -0.68
CIITA-212ENST00000618207 HDHD3Q9BSH5 251 aaPredicted RBP10.81□□□□□ -0.68
CIITA-212ENST00000618207 PDCD10Q9BUL8 212 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 CHST5Q9GZS9 411 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 WNT5BQ9H1J7 359 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 LDAHQ9H6V9 325 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 ZC4H2Q9NQZ6 224 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 ZNF224Q9NZL3 707 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 PLEKHA6Q9Y2H5 1048 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 MED12LQ86YW9 2145 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 CYTIPO60759 359 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 CD74P04233 296 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 CRYGSP22914 178 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 ZNF133P52736 654 aaPredicted RBP10.81□□□□□ -0.68
CIITA-212ENST00000618207 CAPZA1P52907 286 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 SNU13P55769 128 aaKnown RBP10.81□□□□□ -0.68
CIITA-212ENST00000618207 CLDN18P56856 261 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 RAP2BP61225 183 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 HIST1H3AP68431 136 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 ARF1P84077 181 aaKnown RBP10.81□□□□□ -0.68
CIITA-212ENST00000618207 PMP22Q01453 160 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 AIMP2Q13155 320 aaKnown RBP10.81□□□□□ -0.68
CIITA-212ENST00000618207 ZNF124Q15973 351 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 TAF9Q16594 264 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 HIST2H3PS2Q5TEC6 136 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 HIST2H3AQ71DI3 136 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 FAM219AQ8IW50 185 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 CCDC107Q8WV48 283 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 CDC6Q99741 560 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 OR2H1Q9GZK4 316 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 ZNF587BE7ETH6 402 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 DNPH1O43598 174 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 CD79AP11912 226 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 NFYAP23511 347 aaPredicted RBP10.8□□□□□ -0.68
CIITA-212ENST00000618207 THBS4P35443 961 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 MECP2P51608 486 aaKnown RBP10.8□□□□□ -0.68
CIITA-212ENST00000618207 PPIAP62937 165 aaKnown RBP10.8□□□□□ -0.68
CIITA-212ENST00000618207 IL13RA1P78552 427 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 PDSS1Q5T2R2 415 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 ZNF767PQ75MW2 155 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 CPEB3Q8NE35 698 aaKnown RBP10.8□□□□□ -0.68
CIITA-212ENST00000618207 OR56B1Q8NGI3 324 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 DYRK2Q92630 601 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 FBXW5Q969U6 566 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 TRAF4Q9BUZ4 470 aaPredicted RBP10.8□□□□□ -0.68
CIITA-212ENST00000618207 TIMM10BQ9Y5J6 103 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 V9GYS6 101 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 FAM221AA4D161 298 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 CHRM2P08172 466 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 CST2P09228 141 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 AMY2BP19961 511 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 CD34P28906 385 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 ARG2P78540 354 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 OPCMLQ14982 345 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 DRAM2Q6UX65 266 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 ZNF565Q8N9K5 539 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 OR52H1Q8NGJ2 320 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 SVIPQ8NHG7 77 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 ST8SIA4Q92187 359 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 CCDC120Q96HB5 630 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 PRRT1Q99946 306 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 ARL6Q9H0F7 186 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 PCDHGA1Q9Y5H4 931 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 SHANK1Q9Y566 2161 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 IGKV1-27A0A075B6S5 117 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 TERTO14746 1132 aaKnown RBP10.8□□□□□ -0.68
CIITA-212ENST00000618207 OR2A4O95047 310 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 FARS2O95363 451 aaKnown RBP10.8□□□□□ -0.68
CIITA-212ENST00000618207 SYNGR4O95473 234 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 IGLV3-1P01715 115 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 APOC1P02654 83 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 CSTBP04080 98 aaKnown RBP10.8□□□□□ -0.68
CIITA-212ENST00000618207 MELTFP08582 738 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 PRF1P14222 555 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 EIF3IQ13347 325 aaKnown RBP10.8□□□□□ -0.68
CIITA-212ENST00000618207 MEF2DQ14814 521 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 BEX5Q5H9J7 111 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 LRRC20Q8TCA0 184 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 PP6455Q8WZ26 134 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 HAS2Q92819 552 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 OR2A7Q96R45 310 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 FN3KRPQ9HA64 309 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 PARD6AQ9NPB6 346 aa10.8□□□□□ -0.68
CIITA-212ENST00000618207 ZNF318Q5VUA4 2279 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 ZNF98A6NK75 572 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 POM121CA8CG34 1229 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 PRSS44E7EML9 344 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 NKX2-8O15522 239 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 SP1P08047 785 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 OR3A2P47893 321 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 RPS27AP62979 156 aaKnown RBP10.79□□□□□ -0.68
CIITA-212ENST00000618207 RIPPLY1Q0D2K3 151 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 ESCO2Q56NI9 601 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 BHLHE23Q8NDY6 225 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 CSNK2A3Q8NEV1 391 aa10.79□□□□□ -0.68
CIITA-212ENST00000618207 BORCS8Q96FH0 119 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms