RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 NKX2-8O15522 239 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 ZNF133P52736 654 aaPredicted RBP13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 MRPS34P82930 218 aaKnown RBP13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 GK2Q14410 553 aaPredicted RBP13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 USF2Q15853 346 aaPredicted RBP13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 SLC22A6Q4U2R8 563 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 OLFML2AQ68BL7 652 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 CLEC2AQ6UVW9 174 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 FOXL2NBQ6ZUU3 175 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 DOK3Q7L591 496 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 TMEM104Q8NE00 496 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 OR4S1Q8NGB4 309 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 OR51S1Q8NGJ8 323 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 OR52B4Q8NGK2 314 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 FNDC9Q8TBE3 224 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 C15orf40Q8WUR7 153 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 DEFB127Q9H1M4 99 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 METTL17Q9H7H0 456 aaPredicted RBP13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 DLL4Q9NR61 685 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 TMEM38BQ9NVV0 291 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 WASF3Q9UPY6 502 aa13.62□□□□□ -0.23
SEMA3B-212ENST00000616701 DNPH1O43598 174 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 MUC1P15941 1255 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 CSRP2Q16527 193 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 TSPO2Q5TGU0 170 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 FAM27BQ5VT28 67 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 CPNE4Q96A23 557 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 FOXRED1Q96CU9 486 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 GINS4Q9BRT9 223 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 CHIAQ9BZP6 476 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 SLC17A5Q9NRA2 495 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 FRYQ5TBA9 3013 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 NAP1L6A6NFF2 107 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 PYCARD-AS1I3L0S3 204 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 RRP8O43159 456 aaKnown RBP13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 MPIG6BO95866 241 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 RLN1P04808 185 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 CD37P11049 281 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 GNB3P16520 340 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 FOXG1P55316 489 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 CLDN18P56856 261 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 DNM1P46Q6ZS02 220 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 TUSC5Q8IXB3 177 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 GPX8Q8TED1 209 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 NUDCD2Q8WVJ2 157 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 FER1L6-AS2Q96M78 137 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 FOXB1Q99853 325 aa13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 MRPS28Q9Y2Q9 187 aaKnown RBP13.61□□□□□ -0.23
SEMA3B-212ENST00000616701 A0A096LPE4 126 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 A0A1W2PPZ6 126 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 CXorf65A6NEN9 183 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 CYTIPO60759 359 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 MED6O75586 246 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 SP1P08047 785 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 FGF2P09038 288 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 OPCMLQ14982 345 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 NHLRC3Q5JS37 347 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 GVQW1Q8N7I0 195 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 OR10K1Q8NGX5 313 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 RNASE11Q8TAA1 199 aaKnown RBP13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 PIGTQ969N2 578 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 GPR35Q9HC97 309 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 KLK13Q9UKR3 277 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 PIGLQ9Y2B2 252 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 MEIKINA0A087WXM9 373 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 MPTX1A8MV57 137 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 RAB27BO00194 218 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 PPIAP62937 165 aaKnown RBP13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 ZNF529Q6P280 563 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 OR2T35Q8NGX2 323 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 PRRG4Q9BZD6 226 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 SELENOIQ9C0D9 397 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 RAB22AQ9UL26 194 aa13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 SPENQ96T58 3664 aaKnown RBP13.6□□□□□ -0.23
SEMA3B-212ENST00000616701 HPNP05981 417 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 CSF1P09603 554 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 HTR5AP47898 357 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 UBE2MP61081 183 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 TSPAN5P62079 268 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 HIST1H3AP68431 136 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 PMP22Q01453 160 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 HIST2H3PS2Q5TEC6 136 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 HIST2H3AQ71DI3 136 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 SLC16A14Q7RTX9 510 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 C1QL2Q7Z5L3 287 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 SKA3Q8IX90 412 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 GABRG1Q8N1C3 465 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 NAXEQ8NCW5 288 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 DMRTA2Q96SC8 542 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 ALX4Q9H161 411 aaPredicted RBP13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 ZNF69Q9UC07 566 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 MRPS18CQ9Y3D5 142 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 LOC100509620A0A075B734 347 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 MRPL33O75394 65 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 LCATP04180 440 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 AKAIN1P0CW23 69 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 ARG2P78540 354 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 QRFPP83859 136 aa13.59□□□□□ -0.23
SEMA3B-212ENST00000616701 UBE2V2Q15819 145 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms