RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 GZMMP51124 257 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 LIMS2Q7Z4I7 341 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 TAAR6Q96RI8 345 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 RAB40CQ96S21 281 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 NAT8BQ9UHF3 227 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 PPIL1Q9Y3C6 166 aa16.87■□□□□ 0.29
SPAST-203ENST00000615843 MFNGO00587 321 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 TMEM11P17152 192 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 FAM53BQ14153 422 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 SPSB1Q96BD6 273 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 GHITMQ9H3K2 345 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 LIPGQ9Y5X9 500 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 A0A1W2PPE2 198 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 ZNF737O75373 536 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 FMODQ06828 376 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 FAM109BQ6ICB4 259 aaPredicted RBP16.86■□□□□ 0.29
SPAST-203ENST00000615843 CLEC18BQ6UXF7 455 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 OR4C3Q8NH37 302 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 TRMT61AQ96FX7 289 aaKnown RBP16.86■□□□□ 0.29
SPAST-203ENST00000615843 IGHV3-64DA0A0J9YX35 117 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 OR2W5A6NFC9 320 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 CDC14BO60729 498 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 CXCL2P19875 107 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 CHRNA7P36544 502 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 TCTN1Q2MV58 587 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 SNX22Q96L94 193 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 NOL4LQ96MY1 436 aaPredicted RBP16.86■□□□□ 0.29
SPAST-203ENST00000615843 SERTM2A0A1B0GWG4 89 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 EPPINO95925 133 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 OR5AC1P0C628 307 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 PTGFRP43088 359 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 DEGS2Q6QHC5 323 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 CCDC74BQ96LY2 380 aa16.86■□□□□ 0.29
SPAST-203ENST00000615843 ZNF275Q9NSD4 429 aaPredicted RBP16.86■□□□□ 0.29
SPAST-203ENST00000615843 PCDHGA9Q9Y5G4 932 aaKnown RBP16.86■□□□□ 0.29
SPAST-203ENST00000615843 ABCD4O14678 606 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 CCKARP32238 428 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 CXCL12P48061 93 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 ERVS71-1P61550 626 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 PKIAP61925 76 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 SLC25A42Q86VD7 318 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 ZNRF4Q8WWF5 429 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 ASB16Q96NS5 453 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 IL21Q9HBE4 155 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 CYB561P49447 251 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 ZNF816Q0VGE8 651 aaPredicted RBP16.85■□□□□ 0.29
SPAST-203ENST00000615843 FFAR4Q5NUL3 377 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 ZNF362Q5T0B9 420 aaPredicted RBP16.85■□□□□ 0.29
SPAST-203ENST00000615843 MRGPREQ86SM8 312 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 CA5BP1Q8WTZ4 195 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 Q9N2K0 584 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 DEFA4P12838 97 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 IL3RAP26951 378 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 C3orf85A0A1B0GTC6 90 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 CXorf51AA0A1B0GTR3 108 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 DBX1A6NMT0 343 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 KIAA1324LA8MWY0 1029 aaPredicted RBP16.85■□□□□ 0.29
SPAST-203ENST00000615843 TERTO14746 1132 aaKnown RBP16.85■□□□□ 0.29
SPAST-203ENST00000615843 C6orf201Q7Z4U5 140 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 H1FXQ92522 213 aaKnown RBP16.85■□□□□ 0.29
SPAST-203ENST00000615843 ADAT1Q9BUB4 502 aaKnown RBP16.85■□□□□ 0.29
SPAST-203ENST00000615843 PRR13Q9NZ81 148 aa16.85■□□□□ 0.29
SPAST-203ENST00000615843 NKX6-3A6NJ46 265 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 SELEP16581 610 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 SLC38A11Q08AI6 406 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 ARL16Q0P5N6 197 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 ZNF345Q14585 488 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 SPPL3Q8TCT6 385 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 IGHV3-15A0A0B4J1V0 119 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 CNN1P51911 297 aaKnown RBP16.84■□□□□ 0.29
SPAST-203ENST00000615843 CLDN15P56746 228 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 FAM209BQ5JX69 171 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 DCAF12Q5T6F0 453 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 ADPRHL1Q8NDY3 354 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 DUXBA0A1W2PPF3 345 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 CDRT15L2A8MXV6 281 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 CDK2AP1O14519 115 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 ZNF25P17030 456 aaPredicted RBP16.84■□□□□ 0.29
SPAST-203ENST00000615843 OR3A4PP47883 348 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 FCN1O00602 326 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 B4GALT1P15291 398 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 SUMO3P55854 103 aaPredicted RBP16.84■□□□□ 0.29
SPAST-203ENST00000615843 BPIFB3P59826 476 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 FAM78BQ5VT40 261 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 LINC00696Q6ZRV3 163 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 C17orf78Q8N4C9 275 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 MVB12AQ96EY5 273 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 FAAP24Q9BTP7 215 aa16.84■□□□□ 0.29
SPAST-203ENST00000615843 C6orf106Q9H6K1 298 aaPredicted RBP16.84■□□□□ 0.29
SPAST-203ENST00000615843 LOC102723971A0A1B0GUV8 181 aa16.83■□□□□ 0.29
SPAST-203ENST00000615843 JMJD6Q6NYC1 403 aaPredicted RBP16.83■□□□□ 0.29
SPAST-203ENST00000615843 GINS3Q9BRX5 216 aa16.83■□□□□ 0.29
SPAST-203ENST00000615843 SH3BGRL2Q9UJC5 107 aa16.83■□□□□ 0.29
SPAST-203ENST00000615843 HDGFL3Q9Y3E1 203 aa16.83■□□□□ 0.29
SPAST-203ENST00000615843 DLK1P80370 383 aa16.83■□□□□ 0.29
SPAST-203ENST00000615843 BSXQ3C1V8 233 aa16.83■□□□□ 0.29
SPAST-203ENST00000615843 C20orf196Q8IYI0 205 aa16.83■□□□□ 0.29
SPAST-203ENST00000615843 SLC26A10Q8NG04 563 aa16.83■□□□□ 0.29
SPAST-203ENST00000615843 TNFSF18Q9UNG2 199 aa16.83■□□□□ 0.29
SPAST-203ENST00000615843 A0A096LPE4 126 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms