RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 IL12BP29460 328 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 FAM78BQ5VT40 261 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 NRSN1Q8IZ57 195 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 OR4K14Q8NGD5 310 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 CA10Q9NS85 328 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 GABRA3P34903 492 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 ERVK-16P61578 105 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 BCDIN3DQ7Z5W3 292 aaKnown RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 RTN4RL1Q86UN2 441 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 CYB561D1Q8N8Q1 229 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM59Q9BXS4 323 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 TARM1B6A8C7 271 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 FTH1P19P0C7X4 201 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 LSM11P83369 360 aaKnown RBP eCLIP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 PPP1R1AQ13522 171 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 OR9A4Q8NGU2 314 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 CD200R1Q8TD46 325 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 ZNRF4Q8WWF5 429 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 FAM131CQ96AQ9 280 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 WDR76Q9H967 626 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 ARPC3O15145 178 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 GALR3O60755 368 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 CLDN1O95832 211 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 BCL2P10415 239 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 CHST8Q9H2A9 424 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 SLC25A37Q9NYZ2 338 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 CHEK1O14757 476 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 OR1D4P47884 311 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 SEC11AP67812 179 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 FAM71F2Q6NXP2 309 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 CBARPQ8N350 705 aaPredicted RBP4.46□□□□□ -1.69
VPS13D-213ENST00000613099 ASB5Q8WWX0 329 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 MAGT1Q9H0U3 335 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF391Q9UJN7 358 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 TDRD6O60522 2096 aaKnown RBP4.46□□□□□ -1.69
VPS13D-213ENST00000613099 TRAV30A0A087WSZ9 112 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 MLF1P58340 268 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 IL13RA2Q14627 380 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 PNPLA1Q8N8W4 532 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 ACOT4Q8N9L9 421 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 RPS4Y2Q8TD47 263 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM234Q8WY98 164 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 CSTL1Q9H114 145 aa4.46□□□□□ -1.69
VPS13D-213ENST00000613099 C19orf25Q9UFG5 118 aaPredicted RBP4.46□□□□□ -1.69
VPS13D-213ENST00000613099 SMIM28A0A1B0GU29 152 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 C8AP07357 584 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ADRA2AP08913 450 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 C6orf201Q7Z4U5 140 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ACVR1CQ8NER5 493 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 TIMM13Q9Y5L4 95 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 SNAI1O95863 264 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 TMEM95Q3KNT9 176 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 SLC39A5Q6ZMH5 540 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 STAC2Q6ZMT1 411 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ERASQ7Z444 233 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 PHYKPLQ8IUZ5 450 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 YAF2Q8IY57 180 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 OR5D18Q8NGL1 313 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 PBX4Q9BYU1 374 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 CHODLQ9H9P2 273 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 RNF122Q9H9V4 155 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 PLSCR4Q9NRQ2 329 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ELOVL5Q9NYP7 299 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 MRPS16Q9Y3D3 137 aaKnown RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 MT-ND6P03923 174 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 HIST1H1EP10412 219 aaKnown RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 FUT1P19526 365 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 IDSP22304 550 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 OR5K2Q8NHB8 316 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 OR10J5Q8NHC4 309 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF385AQ96PM9 386 aaKnown RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 TSPAN32Q96QS1 320 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 FKRPQ9H9S5 495 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 LHX9Q9NQ69 397 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 SOX1O00570 391 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 OGG1O15527 345 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ERI3O43414 337 aaKnown RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 EPHA8P29322 1005 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 OTX1P32242 354 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ESPNLQ6ZVH7 1005 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 AQP10Q96PS8 301 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 OR6C1Q96RD1 312 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 SMOQ99835 787 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 FZD8Q9H461 694 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 SLC2A4RGQ9NR83 387 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 TMEM242Q9NWH2 141 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 LRRC25Q8N386 305 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 POC1AQ8NBT0 407 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ATG4CQ96DT6 458 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 RTP3Q9BQQ7 232 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 HINT2Q9BX68 163 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 TWSG1Q9GZX9 223 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF770Q6IQ21 691 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 MRPL54Q6P161 138 aaKnown RBP4.46□□□□□ -1.7
VPS13D-213ENST00000613099 OR11G2Q8NGC1 345 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 OR2D2Q9H210 308 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 SRD5A3Q9H8P0 318 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 IL21Q9HBE4 155 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 IGLV3-22A0A075B6J6 115 aa4.46□□□□□ -1.7
VPS13D-213ENST00000613099 TRAV36DV7A0A075B6V5 113 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms