RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 FOXL2NBQ6ZUU3 175 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 TMEM200AQ86VY9 491 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 OR5M9Q8NGP3 310 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 THOC3Q96J01 351 aaKnown RBP12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 S100A13Q99584 98 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 ACKR4Q9NPB9 350 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 CSAG2Q9Y5P2 127 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 BOD1L1Q8NFC6 3051 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 A0A096LPE4 126 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 A0A1W2PPZ6 126 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 FOXI3A8MTJ6 420 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 B8ZZF3 427 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 GLI4P10075 376 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 PGAM2P15259 253 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 CRYGSP22914 178 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 THBS4P35443 961 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 OR3A2P47893 321 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 C3AR1Q16581 482 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 C6orf15Q6UXA7 325 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 SLC51BQ86UW2 128 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 FOXRED2Q8IWF2 684 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 SKA3Q8IX90 412 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 TMEM38BQ9NVV0 291 aa12.27□□□□□ -0.45
PCDHGA3-202ENST00000612467 A0A0U1RQV5 110 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 FAM166BA8MTA8 275 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 C9orf172C9J069 976 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 DUS4LO95620 317 aaKnown RBP12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 FKBP2P26885 142 aaKnown RBP12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 MRPS34P82930 218 aaKnown RBP12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 PIGYQ3MUY2 71 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 FAM89BQ8N5H3 189 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 HAS2Q92819 552 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 SPTSSAQ969W0 71 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 OR10C1Q96KK4 312 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 LIME1Q9H400 295 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 LNP1A1A4G5 178 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 MSGN1A6NI15 193 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 HOXB5P09067 269 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 CCNOP22674 350 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 ZNF133P52736 654 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 DRAM2Q6UX65 266 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 LINC00696Q6ZRV3 163 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 GPR137CQ8N3F9 429 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 KCNRGQ8N5I3 272 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 SEMA6DQ8NFY4 1073 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 OR51F2Q8NH61 342 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 OR1F12Q8NHA8 337 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 SGCZQ96LD1 299 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 CRIM1Q9NZV1 1036 aa12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 FBXO9Q9UK97 447 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA3-202ENST00000612467 IGKV1-12A0A0C4DH73 117 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 TRIM77I1YAP6 450 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 IGKV1D-12P01611 117 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 CYC1P08574 325 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 MPZP25189 248 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 MPLP40238 635 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 CYB561P49447 251 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 GSK3AP49840 483 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 ZNF92Q03936 586 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 DCUN1D4Q92564 292 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 ADGRG7Q96K78 797 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 FOXB1Q99853 325 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 OCSTAMPQ9BR26 566 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 CHMP1AQ9HD42 196 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 PLEKHJ1Q9NW61 149 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 OR5AC2Q9NZP5 309 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 LRFN1Q9P244 771 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 EP300Q09472 2414 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 KANTRA0A1W2PQU2 76 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 DBX1A6NMT0 343 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 SERPINA5P05154 406 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 CRHP06850 196 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 JMJD7P0C870 316 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 TSPO2Q5TGU0 170 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 PDZD9Q8IXQ8 264 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 OR2V1Q8NHB1 315 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 RNF126Q9BV68 326 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 WNT5BQ9H1J7 359 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 GSKIPQ9P0R6 139 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 ANAPC10Q9UM13 185 aa12.25□□□□□ -0.45
PCDHGA3-202ENST00000612467 F5H0A9 414 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 SCGNO76038 276 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 HPP00738 406 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 AKR1C2P52895 323 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 AKR1C1Q04828 323 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 FOXO1Q12778 655 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 BTN1A1Q13410 526 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 TMEM128Q5BJH2 165 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 VAX1Q5SQQ9 334 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 SLC16A14Q7RTX9 510 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 THAP6Q8TBB0 222 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 PPA2Q9H2U2 334 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 OSGIN2Q9Y236 505 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 A0A0B4J2A0 478 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 FIGNL2A6NMB9 653 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 BCL2L11O43521 198 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 SFTPBP07988 381 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 NR2C1P13056 603 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 M6PRP20645 277 aa12.24□□□□□ -0.45
PCDHGA3-202ENST00000612467 RAB35Q15286 201 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms