RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.61□□□□□ -0.55
TCF3-220ENST00000611869 OR5T1Q8NG75 326 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 ST8SIA2Q92186 375 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 CHRNA10Q9GZZ6 450 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 FAM234AQ9H0X4 552 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 SAV1Q9H4B6 383 aaPredicted RBP11.61□□□□□ -0.55
TCF3-220ENST00000611869 RFPL4AA6NLU0 287 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 CEBPZOSA8MTT3 80 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 RFPL4AL1F8VTS6 287 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 LRP3O75074 770 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 SULT1A3P0DMM9 295 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 SULT1A4P0DMN0 295 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 OR2T2Q6IF00 324 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 CHST6Q9GZX3 395 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 ACACAQ13085 2346 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 FGF5P12034 268 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 TNFSF4P23510 183 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 ROM1Q03395 351 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 MZT1Q08AG7 82 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 TRIP6Q15654 476 aaKnown RBP11.6□□□□□ -0.55
TCF3-220ENST00000611869 TAF9BQ9HBM6 251 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 FUT3P21217 361 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 AGFG1P52594 562 aaKnown RBP11.6□□□□□ -0.55
TCF3-220ENST00000611869 ATPAF1Q5TC12 328 aaPredicted RBP11.6□□□□□ -0.55
TCF3-220ENST00000611869 TUSC5Q8IXB3 177 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 KCNRGQ8N5I3 272 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 SPICQ8N5J4 248 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 ZDHHC22Q8N966 263 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 OR6S1Q8NH40 331 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 ZNF519Q8TB69 540 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 EXTL1Q92935 676 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 MED30Q96HR3 178 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 ZNF649Q9BS31 505 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 RTN4RQ9BZR6 473 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 B3GAT1Q9P2W7 334 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 FREM3P0C091 2139 aa11.6□□□□□ -0.55
TCF3-220ENST00000611869 LGALS8O00214 317 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 SNRNP70P08621 437 aaKnown RBP11.59□□□□□ -0.55
TCF3-220ENST00000611869 NKX2-1P43699 371 aaPredicted RBP11.59□□□□□ -0.55
TCF3-220ENST00000611869 C11orf87Q6NUJ2 197 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 ZNF574Q6ZN55 896 aaPredicted RBP11.59□□□□□ -0.55
TCF3-220ENST00000611869 NAA40Q86UY6 237 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 MARC2Q969Z3 335 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 C2orf50Q96LR7 162 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 PRMT8Q9NR22 394 aaPredicted RBP11.59□□□□□ -0.55
TCF3-220ENST00000611869 NBASA2RRP1 2371 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 IGHV1-45A0A0A0MS14 117 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 C7orf66A4D0T2 115 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 TTLL8A6PVC2 850 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 LYPD3O95274 346 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 IFNA17P01571 189 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 NOVA1P51513 510 aaKnown RBP11.59□□□□□ -0.55
TCF3-220ENST00000611869 SVBPQ8N300 66 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 PRR13Q9NZ81 148 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 EDARQ9UNE0 448 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 POLDIP2Q9Y2S7 368 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 A0A1W2PP11 408 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 C9orf170A2RU37 121 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 ZNF205O95201 554 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 CATR1Q13166 79 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 ZNF169Q14929 603 aaPredicted RBP11.59□□□□□ -0.55
TCF3-220ENST00000611869 LINC00114Q6XXX2 140 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 NR2C2APQ86WQ0 139 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 GPX8Q8TED1 209 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 UNQ9370/PRO34162Q6UXP9 181 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 BAP18Q8IXM2 172 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 C9orf62Q8N4C0 152 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 OR13C8Q8NGS7 320 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 SF3B5Q9BWJ5 86 aaKnown RBP11.59□□□□□ -0.55
TCF3-220ENST00000611869 GHITMQ9H3K2 345 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 CYB5R1Q9UHQ9 305 aa11.59□□□□□ -0.55
TCF3-220ENST00000611869 IFNA1P01562 189 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 RPL12P30050 165 aaKnown RBP11.58□□□□□ -0.56
TCF3-220ENST00000611869 HLXQ14774 488 aaPredicted RBP11.58□□□□□ -0.56
TCF3-220ENST00000611869 MSMO1Q15800 293 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 CLPPQ16740 277 aaPredicted RBP11.58□□□□□ -0.56
TCF3-220ENST00000611869 TOR2AQ5JU69 321 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 ZNF529Q6P280 563 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 CNTNAP3Q9BZ76 1288 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 SCN8AQ9UQD0 1980 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 ADAP1O75689 374 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 CLDN1O95832 211 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 CFHR1Q03591 330 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 OR2B11Q5JQS5 317 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 OR1J1Q8NGS3 322 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 MAGT1Q9H0U3 335 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 PPP1R3CQ9UQK1 317 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 ROS1P08922 2347 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 ZNHIT1O43257 154 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 IGF2P01344 180 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 FPR2P25090 351 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 PEA15Q15121 130 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 DCAF10Q5QP82 559 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 ADPRHL1Q8NDY3 354 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 SDSLQ96GA7 329 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 MAP6Q96JE9 813 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 TMEM231Q9H6L2 316 aa11.58□□□□□ -0.56
TCF3-220ENST00000611869 UNKLQ9H9P5 680 aaKnown RBP11.58□□□□□ -0.56
TCF3-220ENST00000611869 SNAPINO95295 136 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 PGA4P0DJD7 388 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms