RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 PSMG1O95456 288 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 APOEP02649 317 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 ORM1P02763 201 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 FABP3P05413 133 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 GUSBP08236 651 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 C8orf88P0DMB2 117 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 RANBP1P43487 201 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 GPR1P46091 355 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 CDK9P50750 372 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 TWF1Q12792 350 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 EBI3Q14213 229 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 TMED2Q15363 201 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 DEFB116Q30KQ4 102 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 TMEM176BQ3YBM2 270 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 CCDC58Q4VC31 144 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 ZCWPW2Q504Y3 356 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 GCSAMLQ5JQS6 135 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 TPRG1LQ5T0D9 272 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 CCNJQ5T5M9 372 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 HES5Q5TA89 166 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 SDHAF4Q5VUM1 108 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 SAXO2Q658L1 398 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 NIPAL1Q6NVV3 410 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 SPESP1Q6UW49 350 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 LRRN1Q6UXK5 716 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 FAM19A1Q7Z5A9 133 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 UNC93AQ86WB7 457 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 RIBC1Q8N443 379 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 ACBD4Q8NC06 268 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 OR4K2Q8NGD2 314 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 OR52N1Q8NH53 320 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC7A13Q8TCU3 470 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 RNASEH2CQ8TDP1 164 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 NEK7Q8TDX7 302 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 LZICQ8WZA0 190 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 S100PBPQ96BU1 408 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 CMTM5Q96DZ9 223 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 WFIKKN1Q96NZ8 548 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 HBEGFQ99075 208 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 EBNA1BP2Q99848 306 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 DDA1Q9BW61 102 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 METTL9Q9H1A3 318 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 OR51B5Q9H339 312 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 NOX3Q9HBY0 568 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 FGF20Q9NP95 211 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 BATF3Q9NR55 127 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 NLE1Q9NVX2 485 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF629Q9UEG4 869 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 STOML2Q9UJZ1 356 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 TFR2Q9UP52 801 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 RCL1Q9Y2P8 373 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 GOLT1BQ9Y3E0 138 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 ARHGAP21Q5T5U3 1957 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 NUP153P49790 1475 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 RAB3GAP2Q9H2M9 1393 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 IGKV2D-24A0A075B6R9 120 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 IGHV3-66A0A0C4DH42 116 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF816-ZNF321PA0A0X1KG74 233 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 INS-IGF2F8WCM5 200 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 K7EN84 100 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 TGOLN2O43493 480 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 PRB2P02812 416 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 HIST1H1CP16403 213 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 FOXN2P32314 431 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC1A1P43005 524 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 TMED10P49755 219 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 IDH3GP51553 393 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 PFN3P60673 137 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 UBE2MP61081 183 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 RBX1P62877 108 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 TNFRSF9Q07011 255 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 TCP10Q12799 353 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 STX4Q12846 297 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNHIT3Q15649 155 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 POU2AF1Q16633 256 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 DEFB115Q30KQ5 88 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 PGGHGQ32M88 737 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 SOHLH1Q5JUK2 328 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 ACTL10Q5JWF8 245 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 AHSA2Q719I0 299 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 SSX7Q7RTT5 188 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 SMIM15Q7Z3B0 74 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 ZFP82Q8N141 532 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 LFNGQ8NES3 379 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 OR10G4Q8NGN3 311 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 OR6K2Q8NGY2 324 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 OR4S2Q8NH73 311 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 OR5AK3PQ8NH89 298 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF502Q8TBZ5 544 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 FAM172AQ8WUF8 416 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 PPWD1Q96BP3 646 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 FLYWCH2Q96CP2 140 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 CENPNQ96H22 339 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 FOPNLQ96NB1 174 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 SERPINB12Q96P63 405 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 MICU1Q9BPX6 476 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 DCUN1D5Q9BTE7 237 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 CALN1Q9BXU9 219 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 TRIM4Q9C037 500 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms