RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 OR51I2Q9H344 312 aa12.01□□□□□ -0.49
HDDC2-204ENST00000608295 TNFRSF19Q9NS68 423 aa12.01□□□□□ -0.49
HDDC2-204ENST00000608295 ONECUT1Q9UBC0 465 aa12.01□□□□□ -0.49
HDDC2-204ENST00000608295 V9GYS6 101 aa12.01□□□□□ -0.49
HDDC2-204ENST00000608295 OR5B21A6NL26 309 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 J3QLW9 94 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 FSTL3O95633 263 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 ATP6V1B1P15313 513 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 ZNF19P17023 458 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 AMY2BP19961 511 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 HILS1P60008 231 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 ARF6P62330 175 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 OCLNQ16625 522 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 SMN1Q16637 294 aaKnown RBP12□□□□□ -0.49
HDDC2-204ENST00000608295 LHFPL3Q86UP9 236 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 TMEM185AQ8NFB2 350 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 SPATA3Q8NHX4 192 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 CYGBQ8WWM9 190 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 AQP3Q92482 292 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 TMIGD2Q96BF3 282 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 C4orf36Q96KX1 117 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 ZNF48Q96MX3 618 aaPredicted RBP12□□□□□ -0.49
HDDC2-204ENST00000608295 GAFA1Q96PS6 74 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 FAM118AQ9NWS6 357 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 SMPD3Q9NY59 655 aaPredicted RBP12□□□□□ -0.49
HDDC2-204ENST00000608295 NLKQ9UBE8 527 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 MYRFQ9Y2G1 1151 aa12□□□□□ -0.49
HDDC2-204ENST00000608295 KIR2DS1A0A191URI9 304 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 LOC100130705A0A1B0GUX0 176 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 A0A1W2PRD5 423 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 A0A1W2PRF3 423 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 A0A1W2PRM7 423 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 ANKRD61A6NGH8 418 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 E9PQ18 207 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 TNFRSF13BO14836 293 aaPredicted RBP11.99□□□□□ -0.49
HDDC2-204ENST00000608295 SLC16A6O15403 523 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 NDUFB3O43676 98 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 SULT1C4O75897 302 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 TOX4O94842 621 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 MUC1P15941 1255 aaPredicted RBP11.99□□□□□ -0.49
HDDC2-204ENST00000608295 NDUFB7P17568 137 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 GABRB1P18505 474 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 FPR2P25090 351 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 CFHR2P36980 270 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 NPY4RP50391 375 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 CAPZA1P52907 286 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 NANOS3P60323 173 aaKnown RBP11.99□□□□□ -0.49
HDDC2-204ENST00000608295 ACTC1P68032 377 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 ACTA1P68133 377 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 TMED1Q13445 227 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 METTL11BQ5VVY1 283 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 MEDAGQ5VYS4 303 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 SLC36A1Q7Z2H8 476 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 ANGPTL5Q86XS5 388 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 ZNF555Q8NEP9 628 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 OR10AC1Q8NH08 325 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 CNIH3Q8TBE1 160 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 APH1BQ8WW43 257 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 TRUB1Q8WWH5 349 aaKnown RBP11.99□□□□□ -0.49
HDDC2-204ENST00000608295 TAF15Q92804 592 aaKnown RBP eCLIP11.99□□□□□ -0.49
HDDC2-204ENST00000608295 UPRTQ96BW1 309 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 ALG8Q9BVK2 526 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 OR14J1Q9UGF5 321 aa11.99□□□□□ -0.49
HDDC2-204ENST00000608295 DNAJC9-AS1A6NH13 148 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 OR2AT4A6NND4 320 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 J3QT63 122 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 NDUFA2O43678 99 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 HTR1AP08908 422 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 CCL1P22362 96 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 DGUOKQ16854 277 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 CDONQ4KMG0 1287 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 CD276Q5ZPR3 534 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 RBMS3Q6XE24 437 aaKnown RBP11.98□□□□□ -0.49
HDDC2-204ENST00000608295 CALHM1Q8IU99 346 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 ACBD7Q8N6N7 88 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 ZDHHC22Q8N966 263 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 ZNRF1Q8ND25 227 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 OR5A2Q8NGI9 324 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 OR10Z1Q8NGY1 313 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 OR2G2Q8NGZ5 317 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 LHX4Q969G2 390 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 RNF166Q96A37 237 aaPredicted RBP11.98□□□□□ -0.49
HDDC2-204ENST00000608295 RFT1Q96AA3 541 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 TBX15Q96SF7 602 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 ISG20L2Q9H9L3 353 aaKnown RBP11.98□□□□□ -0.49
HDDC2-204ENST00000608295 SIRT7Q9NRC8 400 aa11.98□□□□□ -0.49
HDDC2-204ENST00000608295 SLC25A10Q9UBX3 287 aaPredicted RBP11.98□□□□□ -0.49
HDDC2-204ENST00000608295 RPUSD1Q9UJJ7 312 aaKnown RBP11.98□□□□□ -0.49
HDDC2-204ENST00000608295 STAB1Q9NY15 2570 aa11.97□□□□□ -0.49
HDDC2-204ENST00000608295 IGKV1D-17A0A075B6S4 117 aa11.97□□□□□ -0.49
HDDC2-204ENST00000608295 A0A1W2PQ09 198 aa11.97□□□□□ -0.49
HDDC2-204ENST00000608295 PQLC2LA1A4F0 135 aa11.97□□□□□ -0.49
HDDC2-204ENST00000608295 MEX3AA1L020 520 aaKnown RBP11.97□□□□□ -0.49
HDDC2-204ENST00000608295 SNTNA6NMZ2 147 aa11.97□□□□□ -0.49
HDDC2-204ENST00000608295 ZNF879B4DU55 563 aa11.97□□□□□ -0.49
HDDC2-204ENST00000608295 DLGAP1O14490 977 aa11.97□□□□□ -0.49
HDDC2-204ENST00000608295 NXPH2O95156 264 aa11.97□□□□□ -0.49
HDDC2-204ENST00000608295 UBCP0CG48 685 aaKnown RBP11.97□□□□□ -0.49
HDDC2-204ENST00000608295 CALCBP10092 127 aa11.97□□□□□ -0.49
HDDC2-204ENST00000608295 PSG2P11465 335 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms