RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ST6GAL1P15907 406 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CSNK2A2P19784 350 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ALOX5APP20292 161 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 HNF1AP20823 631 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 EPHA8P29322 1005 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 SERPINA4P29622 427 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 NTSP30990 170 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 APLNRP35414 380 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 APOBEC1P41238 236 aaKnown RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR3A2P47893 321 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CAMLGP49069 296 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 PRLHRP49683 370 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 NOVA1P51513 510 aaKnown RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 SGSHP51688 502 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 POLR2HP52434 150 aaKnown RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CCL23P55773 120 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 MTCP1P56278 107 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM33P57088 247 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CARD18P57730 90 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 POLR2LP62875 67 aaKnown RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 BEX3Q00994 111 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 DMWDQ09019 674 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 PMPCAQ10713 525 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 LMAN2Q12907 356 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TAF10Q12962 218 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 HSPB3Q12988 150 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 SGCGQ13326 291 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 UBE2V1Q13404 147 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 RAB32Q13637 225 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZIC1Q15915 447 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TAF9Q16594 264 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ATP6V1FQ16864 119 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ACOT6Q3I5F7 207 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 MORN2Q502X0 79 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 NCR3LG1Q68D85 454 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR4C11Q6IEV9 310 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ARMC6Q6NXE6 501 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 KIRREL2Q6UWL6 708 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CLEC18BQ6UXF7 455 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 KCTD9Q7L273 389 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 GRINAQ7Z429 371 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 C17orf64Q86WR6 236 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 MEX3DQ86XN8 651 aaKnown RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 PRIMA1Q86XR5 153 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CDC20BQ86Y33 519 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 PRSS58Q8IYP2 241 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 DOCK3Q8IZD9 2030 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 LRTM2Q8N967 370 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ADAD2Q8NCV1 583 aaKnown RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 NAXEQ8NCW5 288 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CPEB3Q8NE35 698 aaKnown RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 KLHDC9Q8NEP7 349 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC26A10Q8NG04 563 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR2M7Q8NG81 312 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR52E2Q8NGJ4 325 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR8S1Q8NH09 359 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 MFSD8Q8NHS3 518 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF563Q8TA94 476 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CD300LFQ8TDQ1 290 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM170AQ8WVE7 144 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 HAS2Q92819 552 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 EMG1Q92979 244 aaKnown RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM230Q96A57 120 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM159Q96B96 161 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 FGGYQ96C11 551 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC35A4Q96G79 324 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF845Q96IR2 970 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 FAM71F1Q96KD3 344 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 C16orf92Q96LL3 132 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 LINC00615Q96LM1 132 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF681Q96N22 645 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 HIST1H2AAQ96QV6 131 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TNFRSF13CQ96RJ3 184 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 P2RX4Q99571 388 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TBL1XR1Q9BZK7 514 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR11A1Q9GZK7 315 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 MAGT1Q9H0U3 335 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC25A18Q9H1K4 315 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TCEAL2Q9H3H9 227 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ADAP2Q9NPF8 381 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR2S2Q9NQN1 319 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC2A9Q9NRM0 540 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 DECR2Q9NUI1 292 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 P4HTMQ9NXG6 502 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 FKBP11Q9NYL4 201 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 MRM2Q9UI43 246 aaKnown RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 NSG2Q9Y328 171 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 RHBDD3Q9Y3P4 386 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ENTPD2Q9Y5L3 495 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 PUS1Q9Y606 427 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CHD3Q12873 2000 aaKnown RBP3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 COL4A3Q01955 1670 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 C20orf202A1L168 122 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 NPIPB15A6NHN6 443 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 DHRS7CA6NNS2 312 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF727A8MUV8 499 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF705GA8MUZ8 300 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF732B4DXR9 585 aa3.56□□□□□ -1.84
HMGB1P50-201ENST00000605814 B4E171 279 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms