RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 MPC1LP0DKB6 136 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 SNRPBP14678 240 aaKnown RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 ST6GAL1P15907 406 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 ATXN7L3Q14CW9 347 aaPredicted RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 RAB30Q15771 203 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 FAM110CQ1W6H9 321 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 DCAF8Q5TAQ9 597 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF776Q68DI1 518 aaPredicted RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 UFSP1Q6NVU6 142 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 OPN5Q6U736 354 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 CHRDL2Q6WN34 429 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 MEPCEQ7L2J0 689 aaKnown RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 C1orf174Q8IYL3 243 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 PNPLA1Q8N8W4 532 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 MFSD8Q8NHS3 518 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 ABHD4Q8TB40 342 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 ZBTB45Q96K62 511 aaPredicted RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 MRPL16Q9NX20 251 aaKnown RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 KLK11Q9UBX7 282 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 B4GALT6Q9UBX8 382 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 HHLA2Q9UM44 414 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 MGAMO43451 1857 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 LOC102724200A0A096LPH7 203 aaPredicted RBP7.84□□□□□ -1.15
COMMD3-215ENST00000602574 A0A1W2PR80 420 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 TMEM150BA6NC51 233 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 TAX1BP3O14907 124 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 GASTP01350 101 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 TYMSP04818 313 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 PET100P0DJ07 73 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 AMD1P17707 334 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 TCN2P20062 427 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 FUT3P21217 361 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 TSPOP30536 169 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 PGGT1BP53609 377 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 RPS15P62841 145 aaKnown RBP7.84□□□□□ -1.15
COMMD3-215ENST00000602574 HSD52Q0P140 79 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 P2RY6Q15077 328 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 CD300EQ496F6 205 aaPredicted RBP7.84□□□□□ -1.15
COMMD3-215ENST00000602574 PDLIM3Q53GG5 364 aaPredicted RBP7.84□□□□□ -1.15
COMMD3-215ENST00000602574 GCSAMLQ5JQS6 135 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 FAM180AQ6UWF9 173 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 DOLPP1Q86YN1 238 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 TCTEX1D1Q8N7M0 179 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 OR52E1Q8NGJ3 308 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 HMGB4Q8WW32 186 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 PSMF1Q92530 271 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 PTX4Q96A99 478 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 SARAFQ96BY9 339 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 GPR82Q96P67 336 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 LRTM1Q9HBL6 345 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 PCTPQ9UKL6 214 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 PPIAL4AQ9Y536 164 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 ETV7Q9Y603 341 aa7.84□□□□□ -1.15
COMMD3-215ENST00000602574 PLXNA1Q9UIW2 1896 aa7.84□□□□□ -1.16
COMMD3-215ENST00000602574 RAMP2O60895 175 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 CNIH1O95406 144 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 MAS1P04201 325 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF865P0CJ78 1059 aaPredicted RBP7.83□□□□□ -1.16
COMMD3-215ENST00000602574 OTX2P32243 289 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 S100A3P33764 101 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 HTR6P50406 440 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 CRYBA2P53672 197 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 TPPP2P59282 170 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 CTBP1Q13363 440 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 CEACAM21Q3KPI0 293 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 GTF2H5Q6ZYL4 71 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 SLC39A11Q8N1S5 342 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 MUC15Q8N387 334 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 C2orf73Q8N5S3 287 aaPredicted RBP7.83□□□□□ -1.16
COMMD3-215ENST00000602574 OR52E5Q8NH55 327 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 LGALS14Q8TCE9 139 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 PTH2Q96A98 100 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 BTF3L4Q96K17 158 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 RNF126Q9BV68 326 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 TPSD1Q9BZJ3 242 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 CHST8Q9H2A9 424 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 TM7SF3Q9NS93 570 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF106Q9H2Y7 1883 aaKnown RBP7.83□□□□□ -1.16
COMMD3-215ENST00000602574 B4DGG1 531 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 P2RX6O15547 441 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 ARL6IP5O75915 188 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 C1QL1O75973 258 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 FURINP09958 794 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF286BP0CG31 522 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 ERGP11308 486 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 CD99P14209 185 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 CNN1P51911 297 aaKnown RBP7.83□□□□□ -1.16
COMMD3-215ENST00000602574 HLA-DRB3P79483 266 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 HIST3H3Q16695 136 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 CDO1Q16878 200 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 ABHD17BQ5VST6 288 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 CDCP2Q5VXM1 449 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 FAM219BQ5XKK7 198 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 SLC8B1Q6J4K2 584 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF66Q6ZN08 573 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF429Q86V71 674 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 DEFB125Q8N687 156 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 TMEM217Q8N7C4 229 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 ZBTB34Q8NCN2 500 aa7.83□□□□□ -1.16
COMMD3-215ENST00000602574 SKA2Q8WVK7 121 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms