RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 FBLN5Q9UBX5 448 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 ZNF222Q9UK12 451 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 SF3B6Q9Y3B4 125 aaKnown RBP10.74□□□□□ -0.69
RPS28-204ENST00000602140 TRBV23-1A0A0A0MS06 115 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 A0A0U1RQV5 110 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 TMEM269A0A1B0GVZ9 245 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 ANGPTL7O43827 346 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 CSF1P09603 554 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 CALB2P22676 271 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 SLC2A5P22732 501 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 GABRA5P31644 462 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 CAPZA1P52907 286 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 APOFQ13790 326 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 LY6EQ16553 131 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 TMEM236Q5W0B7 351 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 MOB3CQ70IA8 216 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 KRT74Q7RTS7 529 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 THAP5Q7Z6K1 395 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 COMMD2Q86X83 199 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 OR5A2Q8NGI9 324 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 OR51G2Q8NGK0 314 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 OR5D13Q8NGL4 314 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 CANT1Q8WVQ1 401 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 AQP3Q92482 292 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 RORBQ92753 470 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 YY1AP1Q9H869 796 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 ZNF556Q9HAH1 456 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 FAM206AQ9NX38 181 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 SIGLEC9Q9Y336 463 aa10.73□□□□□ -0.69
RPS28-204ENST00000602140 ACOD1A6NK06 481 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 OR5B21A6NL26 309 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 GSC2O15499 205 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 E2F6O75461 281 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 MRPL3P09001 348 aaKnown RBP10.72□□□□□ -0.69
RPS28-204ENST00000602140 T-ENOLP0DO92 83 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 PRKACGP22612 351 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 PAX6P26367 422 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 RIPPLY1Q0D2K3 151 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 PLCXD3Q63HM9 321 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 KCTD18Q6PI47 426 aaPredicted RBP10.72□□□□□ -0.69
RPS28-204ENST00000602140 HAGHLQ6PII5 290 aaPredicted RBP10.72□□□□□ -0.69
RPS28-204ENST00000602140 DEGS2Q6QHC5 323 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 TRPM8Q7Z2W7 1104 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 PPP1R35Q8TAP8 253 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 OR51E1Q8TCB6 317 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 SDSLQ96GA7 329 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 AJUBAQ96IF1 538 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 MROQ9BYG7 248 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 YIPF3Q9GZM5 350 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 PBOV1Q9GZY1 135 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 FAM234AQ9H0X4 552 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 GPR84Q9NQS5 396 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 C19orf12Q9NSK7 152 aa10.72□□□□□ -0.69
RPS28-204ENST00000602140 RFPL4AA6NLU0 287 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 AQP12BA6NM10 295 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 RFPL4AL1F8VTS6 287 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 ATP6V1B1P15313 513 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 FAHP16930 419 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 HERPUD1Q15011 391 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 LRRC75BQ2VPJ9 315 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 ACP7Q6ZNF0 438 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 Q6ZTK2 550 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 AQP12AQ8IXF9 295 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 MKXQ8IYA7 352 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 CD177Q8N6Q3 437 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 ITFG2Q969R8 447 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 PPP1R14AQ96A00 147 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 ZNF488Q96MN9 340 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 TEAD3Q99594 435 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 THTPAQ9BU02 230 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 TEX12Q9BXU0 123 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 TTTY10Q9BZA0 68 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 MEGF9Q9H1U4 602 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 RASL12Q9NYN1 266 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 TVP23BQ9NYZ1 205 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 PIGLQ9Y2B2 252 aa10.71□□□□□ -0.69
RPS28-204ENST00000602140 PRR32B1ATL7 298 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 SYNGR1O43759 233 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 ZNF254O75437 659 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 MTRF1O75570 445 aaKnown RBP10.7□□□□□ -0.7
RPS28-204ENST00000602140 NRASP01111 189 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 IGLV3-1P01715 115 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 ANXA8P13928 327 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 KIR2DS4P43632 304 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 EFNB2P52799 333 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 RPL31P62899 125 aaKnown RBP10.7□□□□□ -0.7
RPS28-204ENST00000602140 ROM1Q03395 351 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 SNAPC1Q16533 368 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 SMIM21Q3B7S5 101 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 ZBTB37Q5TC79 503 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 TMEM200BQ69YZ2 307 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 HIST2H2BDQ6DRA6 164 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 ZNF679Q8IYX0 411 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 C11orf44Q8N8P7 122 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 POC1AQ8NBT0 407 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 OR4C13Q8NGP0 309 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 OR5K1Q8NHB7 308 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 OR8B4Q96RC9 309 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 HEXA-AS1Q9H8Q6 139 aa10.7□□□□□ -0.7
RPS28-204ENST00000602140 SLC25A19Q9HC21 320 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms