RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 SLC35A2P78381 396 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 CD69Q07108 199 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 TMEM95Q3KNT9 176 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 ARSJQ5FYB0 599 aaPredicted RBP13.49□□□□□ -0.25
USE1-208ENST00000600970 ZNF782Q6ZMW2 699 aaPredicted RBP13.49□□□□□ -0.25
USE1-208ENST00000600970 THAP5Q7Z6K1 395 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 ERI1Q8IV48 349 aaKnown RBP13.49□□□□□ -0.25
USE1-208ENST00000600970 CD177Q8N6Q3 437 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 OR5AU1Q8NGC0 362 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 OR4M1Q8NGD0 313 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 OR9Q2Q8NGE9 314 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 OR4Q3Q8NH05 313 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 HIST1H2AAQ96QV6 131 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 INTS14Q96SY0 518 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 BTBD10Q9BSF8 475 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 MUC13Q9H3R2 512 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 ABCB10Q9NRK6 738 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 RFPL4AA6NLU0 287 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 ZNF732B4DXR9 585 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 RFPL4AL1F8VTS6 287 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 MTRF1O75570 445 aaKnown RBP13.48□□□□□ -0.25
USE1-208ENST00000600970 PF4P02776 101 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 FABP3P05413 133 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 H2BFMP0C1H6 154 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 GNG3P63215 75 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 ZNF273Q14593 569 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 LDLRAD2Q5SZI1 272 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 RASSF6Q6ZTQ3 369 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 LINC00471Q8N535 108 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 RNF148Q8N7C7 305 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 OR2T27Q8NH04 317 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 ZNF671Q8TAW3 534 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 MCUR1Q96AQ8 359 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 FOXRED1Q96CU9 486 aaPredicted RBP13.48□□□□□ -0.25
USE1-208ENST00000600970 MALSU1Q96EH3 234 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 RCC1LQ96I51 464 aaKnown RBP13.48□□□□□ -0.25
USE1-208ENST00000600970 OCSTAMPQ9BR26 566 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 TSSK6Q9BXA6 273 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 TBC1D23Q9NUY8 699 aa13.48□□□□□ -0.25
USE1-208ENST00000600970 TBL2Q9Y4P3 447 aaKnown RBP13.48□□□□□ -0.25
USE1-208ENST00000600970 ODF3BA8MYP8 253 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 SYNGR1O43759 233 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 ARG1P05089 322 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 SSX2Q16385 188 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 CEP78Q5JTW2 689 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 ACP7Q6ZNF0 438 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 SHFQ7M4L6 423 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 ZNF561Q8N587 486 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 AQP3Q92482 292 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 B9D2Q9BPU9 175 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 IL1RAPQ9NPH3 570 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 RASL12Q9NYN1 266 aa13.47□□□□□ -0.25
USE1-208ENST00000600970 C17orf98A8MV24 154 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 DUS4LO95620 317 aaKnown RBP13.46□□□□□ -0.25
USE1-208ENST00000600970 GASTP01350 101 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 ALDOBP05062 364 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 GSTT1P30711 240 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 CEBPDP49716 269 aaPredicted RBP13.46□□□□□ -0.25
USE1-208ENST00000600970 HMGA2P52926 109 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 DLX6P56179 175 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 EGFEM1PQ0D2K5 195 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 CEACAM21Q3KPI0 293 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 DMRTC1Q5HYR2 192 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 TCTEX1D4Q5JR98 221 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 CCDC121Q6ZUS5 278 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 KRT74Q7RTS7 529 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 CALHM1Q8IU99 346 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.46□□□□□ -0.25
USE1-208ENST00000600970 OR8B12Q8NGG6 310 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 MED20Q9H944 212 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 SPAG4Q9NPE6 437 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 BAIAP2Q9UQB8 552 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 LYVE1Q9Y5Y7 322 aa13.46□□□□□ -0.25
USE1-208ENST00000600970 SLC1A7O00341 560 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 CCDC22O60826 627 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 IFNGP01579 166 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 JUNBP17275 347 aaPredicted RBP13.45□□□□□ -0.26
USE1-208ENST00000600970 HOXD3P31249 432 aaPredicted RBP13.45□□□□□ -0.26
USE1-208ENST00000600970 PRDX2P32119 198 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 DYNLT3P51808 116 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 ZNF626Q68DY1 528 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 ZNF770Q6IQ21 691 aaPredicted RBP13.45□□□□□ -0.26
USE1-208ENST00000600970 HAGHLQ6PII5 290 aaPredicted RBP13.45□□□□□ -0.26
USE1-208ENST00000600970 HDXQ7Z353 690 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 POC1AQ8NBT0 407 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 OR2T33Q8NG76 320 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 OR5A2Q8NGI9 324 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 ZNF488Q96MN9 340 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 C1orf21Q9H246 121 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 INPP5EQ9NRR6 644 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 ARMC1Q9NVT9 282 aa13.45□□□□□ -0.26
USE1-208ENST00000600970 TSSC4Q9Y5U2 329 aaPredicted RBP13.45□□□□□ -0.26
USE1-208ENST00000600970 TCRBV4S1A1TA0A5B7 111 aa13.44□□□□□ -0.26
USE1-208ENST00000600970 FAM183AA6NL82 134 aa13.44□□□□□ -0.26
USE1-208ENST00000600970 TNFRSF11BO00300 401 aa13.44□□□□□ -0.26
USE1-208ENST00000600970 KRT36O76013 467 aa13.44□□□□□ -0.26
USE1-208ENST00000600970 SOX14O95416 240 aa13.44□□□□□ -0.26
USE1-208ENST00000600970 ZNF3P17036 446 aa13.44□□□□□ -0.26
USE1-208ENST00000600970 MAP2K3P46734 347 aa13.44□□□□□ -0.26
USE1-208ENST00000600970 SMIM21Q3B7S5 101 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms