RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 COMMD2Q86X83 199 aa13□□□□□ -0.33
VRK3-221ENST00000600284 GID4Q8IVV7 300 aa13□□□□□ -0.33
VRK3-221ENST00000600284 SLC35F2Q8IXU6 374 aa13□□□□□ -0.33
VRK3-221ENST00000600284 TCEANCQ8N8B7 351 aa13□□□□□ -0.33
VRK3-221ENST00000600284 AQP3Q92482 292 aa13□□□□□ -0.33
VRK3-221ENST00000600284 DPAGT1Q9H3H5 408 aa13□□□□□ -0.33
VRK3-221ENST00000600284 CLN6Q9NWW5 311 aa13□□□□□ -0.33
VRK3-221ENST00000600284 PIGLQ9Y2B2 252 aa13□□□□□ -0.33
VRK3-221ENST00000600284 FAM96BQ9Y3D0 163 aa13□□□□□ -0.33
VRK3-221ENST00000600284 AP4S1Q9Y587 144 aa13□□□□□ -0.33
VRK3-221ENST00000600284 A0A0U1RQK1 487 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 ZNF670-ZNF695F2Z2N8 137 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 M0R1W7 72 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 MITFO75030 526 aaPredicted RBP12.99□□□□□ -0.33
VRK3-221ENST00000600284 RHBDL1O75783 438 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 NRASP01111 189 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 TTRP02766 147 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 OMGP23515 440 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 RAG2P55895 527 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 GMFBP60983 142 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 DGUOKQ16854 277 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 CEP78Q5JTW2 689 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 MOB3CQ70IA8 216 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 BCDIN3DQ7Z5W3 292 aaKnown RBP12.99□□□□□ -0.33
VRK3-221ENST00000600284 ELMOD2Q8IZ81 293 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 Q8N7P7 452 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 H1FXQ92522 213 aaKnown RBP12.99□□□□□ -0.33
VRK3-221ENST00000600284 ADGRL4Q9HBW9 690 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 TNFRSF19Q9NS68 423 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 C1RLQ9NZP8 487 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 R4GMQ9 66 aa12.99□□□□□ -0.33
VRK3-221ENST00000600284 IGKV1D-17A0A075B6S4 117 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 DHRS7CA6NNS2 312 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 LOC110117498-PIK3R3F6TDL0 507 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 DLGAP1O14490 977 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 KNG1P01042 644 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 FBP1P09467 338 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 PSG2P11465 335 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 SELLP14151 372 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 FAHP16930 419 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 EEF1B2P24534 225 aaKnown RBP12.98□□□□□ -0.33
VRK3-221ENST00000600284 EPHA2P29317 976 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 MFGE8Q08431 387 aaPredicted RBP12.98□□□□□ -0.33
VRK3-221ENST00000600284 CLVS2Q5SYC1 327 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 ZNF684Q5T5D7 378 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 PLCXD3Q63HM9 321 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 TMEM42Q69YG0 159 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 Q6ZSR3 168 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 ZNF573Q86YE8 665 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 LRTOMTQ8WZ04 291 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 TAF15Q92804 592 aaKnown RBP eCLIP12.98□□□□□ -0.33
VRK3-221ENST00000600284 TNFRSF14Q92956 283 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 PPP1R14AQ96A00 147 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 SDSLQ96GA7 329 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 APOL4Q9BPW4 351 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 METTL8Q9H825 291 aaKnown RBP12.98□□□□□ -0.33
VRK3-221ENST00000600284 SIRT7Q9NRC8 400 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 WARS2Q9UGM6 360 aaKnown RBP12.98□□□□□ -0.33
VRK3-221ENST00000600284 ZNF222Q9UK12 451 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 OR52A1Q9UKL2 312 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 SNX5Q9Y5X3 404 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 V9GYS6 101 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 TRRAPQ9Y4A5 3859 aa12.98□□□□□ -0.33
VRK3-221ENST00000600284 TRBV23-1A0A0A0MS06 115 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 CLPSL1A2RUU4 121 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 RNASEK-C17orf49H0YIS7 233 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 NOS1APO75052 506 aaPredicted RBP12.97□□□□□ -0.33
VRK3-221ENST00000600284 NDUFB7P17568 137 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 GABRA2P47869 451 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 UBE2E1P51965 193 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 RELBQ01201 579 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 BLMHQ13867 455 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 BCL2L15Q5TBC7 163 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 C1orf146Q5VVC0 180 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 OLFML2AQ68BL7 652 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 NCR3LG1Q68D85 454 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 HAGHLQ6PII5 290 aaPredicted RBP12.97□□□□□ -0.33
VRK3-221ENST00000600284 PDZD9Q8IXQ8 264 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 POC1AQ8NBT0 407 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 IL4I1Q96RQ9 567 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 OSBPL10Q9BXB5 764 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 TTTY10Q9BZA0 68 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 MRM2Q9UI43 246 aaKnown RBP12.97□□□□□ -0.33
VRK3-221ENST00000600284 MAB21L2Q9Y586 359 aa12.97□□□□□ -0.33
VRK3-221ENST00000600284 A0A1B0GTI1 187 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 A0A1W2PQ09 198 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 M0R129 80 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 NPFFO15130 113 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 IGHV4-59P01825 116 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 OR2T7P0C7T2 308 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 HTR1FP30939 366 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 ACSM1Q08AH1 577 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 TMED1Q13445 227 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 SMIM21Q3B7S5 101 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 ACP7Q6ZNF0 438 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 GDPGP1Q6ZNW5 385 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 C17orf107Q6ZR85 190 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 AMIGO2Q86SJ2 522 aa12.96□□□□□ -0.33
VRK3-221ENST00000600284 ZNRF1Q8ND25 227 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms