RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 A6NLC8 198 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 LRRC30A6NM36 301 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 CYB5R3P00387 301 aaPredicted RBP15.28■□□□□ 0.04
LIG1-216ENST00000598938 IGHV2-70P01814 119 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 USF1P22415 310 aaPredicted RBP15.28■□□□□ 0.04
LIG1-216ENST00000598938 EMX1Q04741 257 aaPredicted RBP15.28■□□□□ 0.04
LIG1-216ENST00000598938 ZNF826PQ6ZT77 177 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 KCTD8Q6ZWB6 473 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 ZNF367Q7RTV3 350 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 C1orf87Q8N0U7 546 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 SPARTQ8N0X7 666 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 SVOPQ8N4V2 548 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 PARP16Q8N5Y8 322 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 OR13C5Q8NGS8 318 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 TIMD4Q96H15 378 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 OR51I2Q9H344 312 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 RNF7Q9UBF6 113 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 SLC7A11Q9UPY5 501 aa15.28■□□□□ 0.04
LIG1-216ENST00000598938 IGKV1-9A0A0C4DH69 117 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 CDIPTO14735 213 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 FSTL3O95633 263 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 OCM2P0CE71 109 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 IRF2P14316 349 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 ATF1P18846 271 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 CFHR2P36980 270 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 SOX2P48431 317 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 MLLT11Q13015 90 aaPredicted RBP15.27■□□□□ 0.04
LIG1-216ENST00000598938 GPR50Q13585 617 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 TPBGQ13641 420 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 CNN3Q15417 329 aaKnown RBP15.27■□□□□ 0.04
LIG1-216ENST00000598938 AVPI1Q5T686 147 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 ZNF773Q6PK81 442 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 WDR82Q6UXN9 313 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 PEG10Q86TG7 708 aaKnown RBP15.27■□□□□ 0.04
LIG1-216ENST00000598938 SERPINA12Q8IW75 414 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 SCCPDHQ8NBX0 429 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 RPL3LQ92901 407 aaKnown RBP15.27■□□□□ 0.04
LIG1-216ENST00000598938 OPALINQ96PE5 141 aa15.27■□□□□ 0.04
LIG1-216ENST00000598938 WNT9BO14905 357 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 ALX3O95076 343 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 LHBP01229 141 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 CD2P06729 351 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 PCMT1P22061 227 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 FUT6P51993 359 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 CHN2P52757 468 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 BTG1P62324 171 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 ZMYND11Q15326 602 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 Q499Y3 187 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 GCSAMQ8N6F7 178 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 MAPK1IP1LQ8NDC0 245 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 DNAAF1Q8NEP3 725 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 OR5D14Q8NGL3 314 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 OR10Z1Q8NGY1 313 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 NPRL2Q8WTW4 380 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 UFD1Q92890 307 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 TMEM106AQ96A25 262 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 MGLLQ99685 303 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 ZCCHC4Q9H5U6 513 aa15.26■□□□□ 0.03
LIG1-216ENST00000598938 hCG_1807616A0A1W2PRN6 198 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 CD5LO43866 347 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 TNFAIP8O95379 198 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 HSMCR30P0CW71 290 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 CPEP16870 476 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 PRKACBP22694 351 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 UBE2UQ5VVX9 321 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 LIPKQ5VXJ0 399 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 ASPHD2Q6ICH7 369 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 ZNF529Q6P280 563 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 LRRC28Q86X40 367 aaPredicted RBP15.25■□□□□ 0.03
LIG1-216ENST00000598938 ZNF573Q86YE8 665 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 MS4A15Q8N5U1 240 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 OR13C9Q8NGT0 318 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 CLDND2Q8NHS1 167 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 TRMT10AQ8TBZ6 339 aaKnown RBP15.25■□□□□ 0.03
LIG1-216ENST00000598938 AQP3Q92482 292 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 SPSB1Q96BD6 273 aa15.25■□□□□ 0.03
LIG1-216ENST00000598938 METTL17Q9H7H0 456 aaPredicted RBP15.25■□□□□ 0.03
LIG1-216ENST00000598938 IGKV1-27A0A075B6S5 117 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 PPIAL4EA0A075B759 164 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 TRBV5-7A0A0A0MS05 114 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 FAM230AA0A1W2PPH8 454 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 ZNF879B4DU55 563 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 PPIAL4DF5H284 164 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 J3QT63 122 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 SULT1B1O43704 296 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 PPIAL4FP0DN26 164 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 MPZP25189 248 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 AZGP1P25311 298 aaKnown RBP15.24■□□□□ 0.03
LIG1-216ENST00000598938 HAAOP46952 286 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 HOXA4Q00056 320 aaPredicted RBP15.24■□□□□ 0.03
LIG1-216ENST00000598938 TMEM155Q4W5P6 130 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 FAM201AQ5SY85 155 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 HAGHLQ6PII5 290 aaPredicted RBP15.24■□□□□ 0.03
LIG1-216ENST00000598938 LRRC29Q8WV35 223 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 BORCS8Q96FH0 119 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 TAS2R4Q9NYW5 299 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 PPIAL4AQ9Y536 164 aa15.24■□□□□ 0.03
LIG1-216ENST00000598938 ISPDA4D126 451 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 SRRM5B3KS81 715 aa15.23■□□□□ 0.03
LIG1-216ENST00000598938 RHBDL1O75783 438 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms