RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 GLYATL3Q5SZD4 288 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 FIP1L1Q6UN15 594 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 OR13F1Q8NGS4 319 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 RGP1Q92546 391 aaPredicted RBP11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 UFD1Q92890 307 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 LYZL4Q96KX0 146 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 PDCD1LG2Q9BQ51 273 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 BCL2L14Q9BZR8 327 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 OR10A2Q9H208 303 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 POFUT1Q9H488 388 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 RGCCQ9H4X1 137 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 TCF7L1Q9HCS4 588 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 MMP26Q9NRE1 261 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 ZNF391Q9UJN7 358 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 PURGQ9UJV8 347 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 IGHV1-69-2A0A0G2JMI3 117 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 CCRL2O00421 344 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 TPD52L2O43399 206 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 TBX1O43435 398 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 FAM157BP0CG42 384 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 UBCP0CG48 685 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 SELEP16581 610 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 GLRXP35754 106 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 TGFBR2P37173 567 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 PPP1CBP62140 327 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 RPS11P62280 158 aaKnown RBP eCLIP11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 SLC3A1Q07837 685 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 TMEM244Q5VVB8 128 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 LIPKQ5VXJ0 399 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 UNQ6126/PRO20091Q6UXV3 157 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 FBXW12Q6X9E4 464 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 REC114Q7Z4M0 266 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 RDH10Q8IZV5 341 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 OR5L1Q8NGL2 311 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 OR5AK2Q8NH90 309 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 ABHD4Q8TB40 342 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 GHSRQ92847 366 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 ITFG2Q969R8 447 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 YIPF6Q96EC8 236 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 MARS2Q96GW9 593 aaKnown RBP11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 TIMD4Q96H15 378 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 NDUFB11Q9NX14 153 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 C1RLQ9NZP8 487 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 GTF2A1LQ9UNN4 478 aa11.63□□□□□ -0.55
SHKBP1-218ENST00000598907 PNMA8CA0A1B0GUJ8 204 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 P2RY10O00398 339 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 SC5DO75845 299 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 IGHV4-38-2P0DP08 117 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 LOXL3P58215 753 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 ERVS71-1P61550 626 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 ZNF92Q03936 586 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 ZNF154Q13106 437 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 BLMHQ13867 455 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 GK2Q14410 553 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 HLXQ14774 488 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 UNQ9370/PRO34162Q6UXP9 181 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 KRT74Q7RTS7 529 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 MS4A15Q8N5U1 240 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 ZNF676Q8N7Q3 588 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 CCDC54Q8NEL0 328 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 OR1J1Q8NGS3 322 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 OR2AE1Q8NHA4 323 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 OR51E1Q8TCB6 317 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 RAB1CQ92928 201 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 REEP6Q96HR9 211 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 MRI1Q9BV20 369 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 OR2J1Q9GZK6 312 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 COMMD4Q9H0A8 199 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 GPR84Q9NQS5 396 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 PTTG3PQ9NZH4 202 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 RNF114Q9Y508 228 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 N6AMT1Q9Y5N5 214 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 RYR2Q92736 4967 aa11.62□□□□□ -0.55
SHKBP1-218ENST00000598907 TRBV5-5A0A0J9YX44 114 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 hCG_38984A0A1B0GV85 526 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 LOC107986453A0A1B0GWG9 222 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 H3BSA7 217 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 ZNF250P15622 560 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 CFL1P23528 166 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 GABRA5P31644 462 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 RPS25P62851 125 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 FAM3AP98173 230 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 MALLQ13021 153 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 OR8B8Q15620 311 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 TRAM1Q15629 374 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 ODF4Q2M2E3 257 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 C2orf68Q2NKX9 166 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 YIF1BQ5BJH7 314 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 KPRPQ5T749 579 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 SAMD5Q5TGI4 173 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 MBNL2Q5VZF2 373 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 CD200R1LQ6Q8B3 271 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 OR14K1Q8NGZ2 314 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 OR10AC1Q8NH08 325 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 SLC25A40Q8TBP6 338 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 ZDHHC16Q969W1 377 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 KRTAP17-1Q9BYP8 105 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 OR51B6Q9H340 312 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 OPA3Q9H6K4 179 aa11.61□□□□□ -0.55
SHKBP1-218ENST00000598907 TAAR3PQ9P1P4 343 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms