RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 HAGHLQ6PII5 290 aaPredicted RBP11.54□□□□□ -0.56
UPF1-205ENST00000598209 EGFL6Q8IUX8 553 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 TEX29Q8N6K0 151 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 TECTBQ96PL2 329 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 JAM3Q9BX67 310 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 WDR13Q9H1Z4 485 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 ERVK-18Q9QC07 812 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 OPN4Q9UHM6 478 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 INSIG2Q9Y5U4 225 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 PQLC2LA1A4F0 135 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 IRGMA1A4Y4 181 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 OR4C45A6NMZ5 311 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 ISG15P05161 165 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 LIMS3P0CW19 117 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 LIMS4P0CW20 117 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 ADRA2CP18825 462 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 DCKP27707 260 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 NPY4RP50391 375 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 PAX2Q02962 417 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 C1QL2Q7Z5L3 287 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 ZNF573Q86YE8 665 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 ZNF671Q8TAW3 534 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 NRG4Q8WWG1 115 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 RAB40AQ8WXH6 277 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 AQP3Q92482 292 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 C10orf35Q96D05 121 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 CHST5Q9GZS9 411 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 RASSF4Q9H2L5 321 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 KAAG1Q9UBP8 84 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 DNAJB11Q9UBS4 358 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 CUBNO60494 3623 aa11.53□□□□□ -0.56
UPF1-205ENST00000598209 IGHV2-70DA0A0C4DH43 119 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 E9PI62 339 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 H0YHG0 523 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 J3QT63 122 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 TMPRSS2O15393 492 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 GATBO75879 557 aaKnown RBP11.52□□□□□ -0.57
UPF1-205ENST00000598209 GLRA1P23415 457 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 HAAOP46952 286 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 ETV1P50549 477 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 GBX2P52951 348 aaPredicted RBP11.52□□□□□ -0.57
UPF1-205ENST00000598209 MRPL28Q13084 256 aaKnown RBP11.52□□□□□ -0.57
UPF1-205ENST00000598209 UBE2V2Q15819 145 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 STUMQ69YW2 141 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 BTNL3Q6UXE8 466 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 ZNF676Q8N7Q3 588 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 OR5T2Q8NGG2 359 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 OR10AC1Q8NH08 325 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 NANPQ8TBE9 248 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 TRMT10AQ8TBZ6 339 aaKnown RBP11.52□□□□□ -0.57
UPF1-205ENST00000598209 NPRL2Q8WTW4 380 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 TFAP2CQ92754 450 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 DACT3Q96B18 629 aaPredicted RBP11.52□□□□□ -0.57
UPF1-205ENST00000598209 C12orf43Q96C57 262 aaKnown RBP11.52□□□□□ -0.57
UPF1-205ENST00000598209 ADAT3Q96EY9 351 aaPredicted RBP11.52□□□□□ -0.57
UPF1-205ENST00000598209 CCL13Q99616 98 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 MRI1Q9BV20 369 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 SMURF1Q9HCE7 757 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 SNTG1Q9NSN8 517 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 HHLA2Q9UM44 414 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 DIMT1Q9UNQ2 313 aaKnown RBP11.52□□□□□ -0.57
UPF1-205ENST00000598209 SLC7A11Q9UPY5 501 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 AUP1Q9Y679 476 aa11.52□□□□□ -0.57
UPF1-205ENST00000598209 A0A1B0GW55 424 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 FAM230AA0A1W2PPH8 454 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 C22orf46C9J442 243 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 DVL1O14640 695 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 SYNGR1O43759 233 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 FCN3O75636 299 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 SERPINA3P01011 423 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 CCDC159P0C7I6 412 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 DUX4L2P0CJ85 424 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 DUX4L3P0CJ86 424 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 DUX4L4P0CJ87 422 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 DUX4L5P0CJ88 424 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 DUX4L6P0CJ89 424 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 DUX4L7P0CJ90 424 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 ZNF20P17024 532 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 TGM4P49221 684 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 AQP4P55087 323 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 PAX8Q06710 450 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 LAIR2Q6ISS4 152 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 DUX4L9Q6RFH8 374 aaPredicted RBP11.51□□□□□ -0.57
UPF1-205ENST00000598209 SLC36A1Q7Z2H8 476 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 OR51A4Q8NGJ6 313 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 OR13C3Q8NGS6 347 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 HAVCR2Q8TDQ0 301 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 FBLIM1Q8WUP2 373 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 PP6455Q8WZ26 134 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 GGHQ92820 318 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 TMIGD2Q96BF3 282 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 FGGYQ96C11 551 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 TMEM80Q96HE8 168 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 NUDT16L1Q9BRJ7 211 aaKnown RBP11.51□□□□□ -0.57
UPF1-205ENST00000598209 NLKQ9UBE8 527 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 DUX4Q9UBX2 424 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 POLDIP2Q9Y2S7 368 aa11.51□□□□□ -0.57
UPF1-205ENST00000598209 CAB39Q9Y376 341 aaPredicted RBP11.51□□□□□ -0.57
UPF1-205ENST00000598209 EXOSC1Q9Y3B2 195 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms