RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 ERVK13-1Q9NX77 482 aa18.96■□□□□ 0.63
IRF3-220ENST00000598108 DUX4Q9UBX2 424 aa18.96■□□□□ 0.63
IRF3-220ENST00000598108 AUP1Q9Y679 476 aa18.96■□□□□ 0.63
IRF3-220ENST00000598108 IGHV2-70DA0A0C4DH43 119 aa18.95■□□□□ 0.62
IRF3-220ENST00000598108 LOC107986453A0A1B0GWG9 222 aa18.95■□□□□ 0.62
IRF3-220ENST00000598108 OR5B21A6NL26 309 aa18.95■□□□□ 0.62
IRF3-220ENST00000598108 FSHBP01225 129 aa18.95■□□□□ 0.62
IRF3-220ENST00000598108 HAGHLQ6PII5 290 aaPredicted RBP18.95■□□□□ 0.62
IRF3-220ENST00000598108 FGFRL1Q8N441 504 aa18.95■□□□□ 0.62
IRF3-220ENST00000598108 AQP3Q92482 292 aa18.95■□□□□ 0.62
IRF3-220ENST00000598108 ADI1Q9BV57 179 aa18.95■□□□□ 0.62
IRF3-220ENST00000598108 DCLRE1BQ9H816 532 aa18.95■□□□□ 0.62
IRF3-220ENST00000598108 SNTG1Q9NSN8 517 aa18.95■□□□□ 0.62
IRF3-220ENST00000598108 ERVK-18Q9QC07 812 aa18.95■□□□□ 0.62
IRF3-220ENST00000598108 KIR2DS1A0A191URI9 304 aa18.94■□□□□ 0.62
IRF3-220ENST00000598108 PQLC2LA1A4F0 135 aa18.94■□□□□ 0.62
IRF3-220ENST00000598108 TFF1P04155 84 aa18.94■□□□□ 0.62
IRF3-220ENST00000598108 GNAO1P09471 354 aa18.94■□□□□ 0.62
IRF3-220ENST00000598108 UBE2V2Q15819 145 aa18.94■□□□□ 0.62
IRF3-220ENST00000598108 NANPQ8TBE9 248 aa18.94■□□□□ 0.62
IRF3-220ENST00000598108 TECTBQ96PL2 329 aa18.94■□□□□ 0.62
IRF3-220ENST00000598108 INPP5EQ9NRR6 644 aa18.94■□□□□ 0.62
IRF3-220ENST00000598108 KAAG1Q9UBP8 84 aa18.94■□□□□ 0.62
IRF3-220ENST00000598108 DNHD1Q96M86 4753 aa18.94■□□□□ 0.62
IRF3-220ENST00000598108 ANKRD61A6NGH8 418 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 E9PI62 339 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 DVL1O14640 695 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 TMPRSS2O15393 492 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 HTR1AP08908 422 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 UBCP0CG48 685 aaKnown RBP18.93■□□□□ 0.62
IRF3-220ENST00000598108 NPY4RP50391 375 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 ACTA2P62736 377 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 ACTG2P63267 376 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 KLHL22Q53GT1 634 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 STUMQ69YW2 141 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 SYS1Q8N2H4 156 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 FAM216BQ8N7L0 139 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 OR10AC1Q8NH08 325 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 C12orf43Q96C57 262 aaKnown RBP18.93■□□□□ 0.62
IRF3-220ENST00000598108 NUDT16L1Q9BRJ7 211 aaKnown RBP18.93■□□□□ 0.62
IRF3-220ENST00000598108 FGF20Q9NP95 211 aaPredicted RBP18.93■□□□□ 0.62
IRF3-220ENST00000598108 DNAJB11Q9UBS4 358 aa18.93■□□□□ 0.62
IRF3-220ENST00000598108 OR4C45A6NMZ5 311 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 SYNGR1O43759 233 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 ISG15P05161 165 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 LIMS3P0CW19 117 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 LIMS4P0CW20 117 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 EPHA1P21709 976 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 CAPGP40121 348 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 HAAOP46952 286 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 CCR9P51686 369 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 ALKBH1Q13686 389 aaKnown RBP18.92■□□□□ 0.62
IRF3-220ENST00000598108 KLF17Q5JT82 389 aaPredicted RBP18.92■□□□□ 0.62
IRF3-220ENST00000598108 ATPAF1Q5TC12 328 aaPredicted RBP18.92■□□□□ 0.62
IRF3-220ENST00000598108 TMEM244Q5VVB8 128 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 TEX29Q8N6K0 151 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 CCDC54Q8NEL0 328 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 ZNF671Q8TAW3 534 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 TRMT10AQ8TBZ6 339 aaKnown RBP18.92■□□□□ 0.62
IRF3-220ENST00000598108 ADAT3Q96EY9 351 aaPredicted RBP18.92■□□□□ 0.62
IRF3-220ENST00000598108 ZNF488Q96MN9 340 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 MRI1Q9BV20 369 aa18.92■□□□□ 0.62
IRF3-220ENST00000598108 SELLP14151 372 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 TGM4P49221 684 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 SLC34A1Q06495 639 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 LAIR2Q6ISS4 152 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 BTNL3Q6UXE8 466 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 ANGPTL5Q86XS5 388 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 ZNF573Q86YE8 665 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 OR51A4Q8NGJ6 313 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 ANGPTL6Q8NI99 470 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 NPRL2Q8WTW4 380 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 NRG4Q8WWG1 115 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 MRPL48Q96GC5 212 aaKnown RBP18.91■□□□□ 0.62
IRF3-220ENST00000598108 OCEL1Q9H607 264 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 PLEKHA1Q9HB21 404 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 COL6A5A8TX70 2615 aa18.91■□□□□ 0.62
IRF3-220ENST00000598108 H0YAE9 185 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 J3QT63 122 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 GLRA1P23415 457 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 ETV1P50549 477 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 IL18R1Q13478 541 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 CALHM1Q8IU99 346 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 EGFL6Q8IUX8 553 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 SETD9Q8NE22 299 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 FGGYQ96C11 551 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 JAM3Q9BX67 310 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 CHST5Q9GZS9 411 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 NLKQ9UBE8 527 aa18.9■□□□□ 0.62
IRF3-220ENST00000598108 IGKV1-27A0A075B6S5 117 aa18.89■□□□□ 0.61
IRF3-220ENST00000598108 FAM230AA0A1W2PPH8 454 aa18.89■□□□□ 0.61
IRF3-220ENST00000598108 ENSAO43768 121 aaKnown RBP18.89■□□□□ 0.61
IRF3-220ENST00000598108 RGS9O75916 674 aaPredicted RBP18.89■□□□□ 0.61
IRF3-220ENST00000598108 DCKP27707 260 aa18.89■□□□□ 0.61
IRF3-220ENST00000598108 IKZF1Q13422 519 aa18.89■□□□□ 0.61
IRF3-220ENST00000598108 CD276Q5ZPR3 534 aa18.89■□□□□ 0.61
IRF3-220ENST00000598108 BTN2A1Q7KYR7 527 aa18.89■□□□□ 0.61
IRF3-220ENST00000598108 C22orf15Q8WYQ4 148 aa18.89■□□□□ 0.61
IRF3-220ENST00000598108 ST8SIA4Q92187 359 aa18.89■□□□□ 0.61
IRF3-220ENST00000598108 TMIGD2Q96BF3 282 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms