RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 DHDHQ9UQ10 334 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 WNK2Q9Y3S1 2297 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 FAM230AA0A1W2PPH8 454 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 CEACAM18A8MTB9 384 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 B4DSR2 109 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 C3orf80F5H4A9 247 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 OGG1O15527 345 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 RGS10O43665 173 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 FSTL3O95633 263 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 EGR1P18146 543 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 HOXA4Q00056 320 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 UBE2V2Q15819 145 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 KCNJ8Q15842 424 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 ZNF404Q494X3 552 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 FAM166AQ6J272 317 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 HAGHLQ6PII5 290 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 ZNF573Q86YE8 665 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 ZFP41Q8N8Y5 198 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 ZNF485Q8NCK3 441 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 RPS4Y2Q8TD47 263 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 SGCDQ92629 289 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 SMIM19Q96E16 107 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 C1orf159Q96HA4 380 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 TMEM246Q9BRR3 403 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 MND1Q9BWT6 205 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 RASSF4Q9H2L5 321 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 DUSP21Q9H596 190 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 LPAR2Q9HBW0 351 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 PCDHGB5Q9Y5G0 923 aa16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 SIRT4Q9Y6E7 314 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-214ENST00000597396 NSD1Q96L73 2696 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 TRAV38-1A0A0B4J264 116 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 PQLC2LA1A4F0 135 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 OOEPA6NGQ2 149 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 A8MV72 311 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 LHBP01229 141 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 OCM2P0CE71 109 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 OCMP0CE72 109 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 RPS2P15880 293 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 CRHBPP24387 322 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 CFHR2P36980 270 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 HAAOP46952 286 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 GMFBP60983 142 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 RNLSQ5VYX0 342 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 UTS2BQ765I0 119 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 OR51F2Q8NH61 342 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 ZNF671Q8TAW3 534 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 BORCS8Q96FH0 119 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 CDCA4Q9BXL8 241 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 CCDC90BQ9GZT6 254 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 MIOXQ9UGB7 285 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 KCNS2Q9ULS6 477 aa16.47■□□□□ 0.23
SHKBP1-214ENST00000597396 PNMA8CA0A1B0GUJ8 204 aa16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 SRRM5B3KS81 715 aa16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 DENRO43583 198 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 MT-ND2P03891 347 aa16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 ATF1P18846 271 aa16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 EEF1B2P24534 225 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 FUT6P51993 359 aa16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 DMKNQ6E0U4 476 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 DCDC5Q6ZRR9 648 aa16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 GLCCI1Q86VQ1 547 aa16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 GPR148Q8TDV2 347 aa16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 ZNF281Q9Y2X9 895 aa16.46■□□□□ 0.23
SHKBP1-214ENST00000597396 IGHV3OR15-7A0A075B7D8 119 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 F5H0A9 414 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 J3QT63 122 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 AKR7A2O43488 359 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 RHBDL1O75783 438 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 CD2P06729 351 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 MSMBP08118 114 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 PRKACBP22694 351 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 SOX2P48431 317 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 MICBQ29980 383 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 ESCO2Q56NI9 601 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 NLRC3Q7RTR2 1065 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 OR8B3Q8NGG8 313 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 OR13C9Q8NGT0 318 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 AQP3Q92482 292 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 RGP1Q92546 391 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 NEIL1Q96FI4 390 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 OR8B2Q96RD0 313 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 ZCCHC4Q9H5U6 513 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 NEK6Q9HC98 313 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 DNAJB11Q9UBS4 358 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 POLDIP2Q9Y2S7 368 aa16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 FN1P02751 2386 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-214ENST00000597396 SONP18583 2426 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 FOXH1O75593 365 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 GYPAP02724 150 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 MUC1P15941 1255 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 CELP19835 753 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 GLRA1P23415 457 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 AZGP1P25311 298 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 ATP1B3P54709 279 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 DVL1P1P54792 670 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 IRF3Q14653 427 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 MED22Q15528 200 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 TEX36Q5VZQ5 186 aa16.44■□□□□ 0.22
SHKBP1-214ENST00000597396 PRSS48Q7RTY5 328 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms