RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 GATAD2BQ8WXI9 593 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 AQP3Q92482 292 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 CENPNQ96H22 339 aaPredicted RBP10.74□□□□□ -0.69
LIG1-212ENST00000596549 RIBC2Q9H4K1 309 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 SIRT7Q9NRC8 400 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 ACOXLQ9NUZ1 547 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 ONECUT1Q9UBC0 465 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 ENOPH1Q9UHY7 261 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 OR52A1Q9UKL2 312 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 GTF2A1LQ9UNN4 478 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 SLC22A13Q9Y226 551 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 KPTNQ9Y664 436 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 A0A0U1RQK1 487 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 A0A1B0GVI7 797 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 OR2AT4A6NND4 320 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 H3BNX3 289 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 SYNGR1O43759 233 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 MDKP21741 143 aaPredicted RBP10.73□□□□□ -0.69
LIG1-212ENST00000596549 CCL1P22362 96 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 HTR1FP30939 366 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 IL13RA1P78552 427 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 RIPPLY1Q0D2K3 151 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 KLRD1Q13241 179 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 ZNF684Q5T5D7 378 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 BCL2L15Q5TBC7 163 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 HAGHLQ6PII5 290 aaPredicted RBP10.73□□□□□ -0.69
LIG1-212ENST00000596549 MOB3CQ70IA8 216 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 THAP5Q7Z6K1 395 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 KIR3DL3Q8N743 410 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 OR5A2Q8NGI9 324 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 ZNF488Q96MN9 340 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 ZNF747Q9BV97 191 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 CHIAQ9BZP6 476 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 CNTD2Q9H8S5 307 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 GPR173Q9NS66 373 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 TNFRSF19Q9NS68 423 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 H2AFY2Q9P0M6 372 aaPredicted RBP10.73□□□□□ -0.69
LIG1-212ENST00000596549 SLC25A10Q9UBX3 287 aaPredicted RBP10.73□□□□□ -0.69
LIG1-212ENST00000596549 WARS2Q9UGM6 360 aaKnown RBP10.73□□□□□ -0.69
LIG1-212ENST00000596549 ENPP5Q9UJA9 477 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 MAB21L2Q9Y586 359 aa10.73□□□□□ -0.69
LIG1-212ENST00000596549 A0A1W2PQL4 384 aaPredicted RBP10.72□□□□□ -0.69
LIG1-212ENST00000596549 A6NIN4 97 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 E9PQ18 207 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 RNASEK-C17orf49H0YIS7 233 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 EI24O14681 340 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 GPR37O15354 613 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 CIB2O75838 187 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 NRASP01111 189 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 PSG2P11465 335 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 OMGP23515 440 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 CAV3P56539 151 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 RELBQ01201 579 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 LRRC10Q5BKY1 277 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 C16orf87Q6PH81 154 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 METAP1DQ6UB28 335 aaPredicted RBP10.72□□□□□ -0.69
LIG1-212ENST00000596549 LDLRAD3Q86YD5 345 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 POC1AQ8NBT0 407 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 ZNRF1Q8ND25 227 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 H1FXQ92522 213 aaKnown RBP10.72□□□□□ -0.69
LIG1-212ENST00000596549 TNFRSF14Q92956 283 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 ITFG2Q969R8 447 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 ZDHHC16Q969W1 377 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 RNF166Q96A37 237 aaPredicted RBP10.72□□□□□ -0.69
LIG1-212ENST00000596549 EME1Q96AY2 570 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 HIST1H2AAQ96QV6 131 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 UNKLQ9H9P5 680 aaKnown RBP10.72□□□□□ -0.69
LIG1-212ENST00000596549 NOX4Q9NPH5 578 aa10.72□□□□□ -0.69
LIG1-212ENST00000596549 PQLC2LA1A4F0 135 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 FAM181BA6NEQ2 426 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 H3BSH0 61 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 J3QT63 122 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 MTRF1O75570 445 aaKnown RBP10.71□□□□□ -0.69
LIG1-212ENST00000596549 RPP14O95059 124 aaKnown RBP10.71□□□□□ -0.69
LIG1-212ENST00000596549 ALPLP05186 524 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 ACAA1P09110 424 aaPredicted RBP10.71□□□□□ -0.69
LIG1-212ENST00000596549 PGA5P0DJD9 388 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 HAAOP46952 286 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 CEBPDP49716 269 aaPredicted RBP10.71□□□□□ -0.69
LIG1-212ENST00000596549 ACTR3P61158 418 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 ISL1P61371 349 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 ZNF85Q03923 595 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 KPNB1Q14974 876 aaKnown RBP10.71□□□□□ -0.69
LIG1-212ENST00000596549 ODF4Q2M2E3 257 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 CLVS2Q5SYC1 327 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 FIP1L1Q6UN15 594 aaKnown RBP10.71□□□□□ -0.69
LIG1-212ENST00000596549 ACP7Q6ZNF0 438 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 CATSPERDQ86XM0 798 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 CALHM1Q8IU99 346 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 BATF2Q8N1L9 274 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 YIPF7Q8N8F6 280 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 OR8J1Q8NGP2 316 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 RORBQ92753 470 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 UBE2FQ969M7 185 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 TMIGD2Q96BF3 282 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 DMRTB1Q96MA1 342 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 RBM4BQ9BQ04 359 aaKnown RBP10.71□□□□□ -0.69
LIG1-212ENST00000596549 SNX5Q9Y5X3 404 aa10.71□□□□□ -0.69
LIG1-212ENST00000596549 DHRS7CA6NNS2 312 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 DLGAP1O14490 977 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms