RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 DYSFO75923 2080 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 IGKV1-12A0A0C4DH73 117 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 LRP5LA4QPB2 252 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 TMEM210A6NLX4 147 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 ZNF879B4DU55 563 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 SYNGR1O43759 233 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 NOS1APO75052 506 aaPredicted RBP8.86□□□□□ -0.99
LIG1-210ENST00000596332 IGKV1D-12P01611 117 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 ACAA1P09110 424 aaPredicted RBP8.86□□□□□ -0.99
LIG1-210ENST00000596332 OCM2P0CE71 109 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 JUNBP17275 347 aaPredicted RBP8.86□□□□□ -0.99
LIG1-210ENST00000596332 ADRA2CP18825 462 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 TNFSF4P23510 183 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 GNALP38405 381 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 ZP1P60852 638 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 GNG3P63215 75 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 FABP5Q01469 135 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 ACSM3Q53FZ2 586 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 AVPI1Q5T686 147 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 PLCXD3Q63HM9 321 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 KCTD8Q6ZWB6 473 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 C1QL2Q7Z5L3 287 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 LRRC28Q86X40 367 aaPredicted RBP8.86□□□□□ -0.99
LIG1-210ENST00000596332 SERPINA12Q8IW75 414 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 C19orf18Q8NEA5 215 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 DNAAF1Q8NEP3 725 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 TSPAN14Q8NG11 270 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 OR13C9Q8NGT0 318 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 OR8S1Q8NH09 359 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 NPRL2Q8WTW4 380 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 TMEM203Q969S6 136 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 C1orf159Q96HA4 380 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 NR1H4Q96RI1 486 aaPredicted RBP8.86□□□□□ -0.99
LIG1-210ENST00000596332 GFI1Q99684 422 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 NKX3-1Q99801 234 aaPredicted RBP8.86□□□□□ -0.99
LIG1-210ENST00000596332 MICU1Q9BPX6 476 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 RTL8AQ9BWD3 113 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 WDR13Q9H1Z4 485 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 ZCCHC4Q9H5U6 513 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 BATF3Q9NR55 127 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 C14orf119Q9NWQ9 140 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 TAS2R4Q9NYW5 299 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 MTCH1Q9NZJ7 389 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 DHDHQ9UQ10 334 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 NPTNQ9Y639 398 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 CREBBPQ92793 2442 aa8.86□□□□□ -0.99
LIG1-210ENST00000596332 OR5B21A6NL26 309 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 ANXA2P2A6NMY6 339 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 SRRM5B3KS81 715 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 TPD52L2O43399 206 aaKnown RBP8.85□□□□□ -0.99
LIG1-210ENST00000596332 TNFAIP8O95379 198 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 ERCC1P07992 297 aaPredicted RBP8.85□□□□□ -0.99
LIG1-210ENST00000596332 RPSAP08865 295 aaKnown RBP8.85□□□□□ -0.99
LIG1-210ENST00000596332 CSF3P09919 207 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 UCHL1P09936 223 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 HSMCR30P0CW71 290 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 AZGP1P25311 298 aaKnown RBP8.85□□□□□ -0.99
LIG1-210ENST00000596332 FUT6P51993 359 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 LOXL1Q08397 574 aaPredicted RBP8.85□□□□□ -0.99
LIG1-210ENST00000596332 HFEQ30201 348 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 TEX36Q5VZQ5 186 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 CLEC2AQ6UVW9 174 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 LYPD2Q6UXB3 125 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 ASCL4Q6XD76 172 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 ZNF841Q6ZN19 808 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 LRRTM1Q86UE6 522 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 FTMTQ8N4E7 242 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 SVOPQ8N4V2 548 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 MS4A15Q8N5U1 240 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 OR52N4Q8NGI2 321 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 OR5D14Q8NGL3 314 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 CLDND2Q8NHS1 167 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 TRMT10AQ8TBZ6 339 aaKnown RBP8.85□□□□□ -0.99
LIG1-210ENST00000596332 COX4I2Q96KJ9 171 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 ZNF488Q96MN9 340 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 SPACA5Q96QH8 159 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 TMEM246Q9BRR3 403 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 TMED9Q9BVK6 235 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 FN3KRPQ9HA64 309 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 HES4Q9HCC6 221 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 ABCB9Q9NP78 766 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 NOX4Q9NPH5 578 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 NDUFB11Q9NX14 153 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 RNF7Q9UBF6 113 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 NOP16Q9Y3C1 178 aaKnown RBP8.85□□□□□ -0.99
LIG1-210ENST00000596332 CR1P17927 2039 aa8.85□□□□□ -0.99
LIG1-210ENST00000596332 ABCA2Q9BZC7 2435 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.84□□□□□ -0.99
LIG1-210ENST00000596332 FAM230AA0A1W2PPH8 454 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 F5H0A9 414 aaPredicted RBP8.84□□□□□ -0.99
LIG1-210ENST00000596332 H7C1Q1 480 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 IFNL4K9M1U5 179 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 GABRPO00591 440 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 PPIHO43447 177 aaKnown RBP8.84□□□□□ -0.99
LIG1-210ENST00000596332 AKR7A2O43488 359 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 SULT1B1O43704 296 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 TFF1P04155 84 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 ALDOBP05062 364 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 TFAP2AP05549 437 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms