RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 MED20Q9H944 212 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 CMC2Q9NRP2 79 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 ARMC1Q9NVT9 282 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 FAM183AA6NL82 134 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 RFPL4AA6NLU0 287 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 ZNF732B4DXR9 585 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 RFPL4AL1F8VTS6 287 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 K7EIL1 84 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 CCNB2O95067 398 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 MPIG6BO95866 241 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 IFNGP01579 166 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 IGLL1P15814 213 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 CCL3L1P16619 93 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 ZNF3P17036 446 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 COX7A1P24310 79 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 PRDX6P30041 224 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 MAGEA2P43356 314 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 PSMA6P60900 246 aaKnown RBP8.04□□□□□ -1.12
LIG1-209ENST00000596104 RPL31P62899 125 aaKnown RBP8.04□□□□□ -1.12
LIG1-209ENST00000596104 ZNF273Q14593 569 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 CNN3Q15417 329 aaKnown RBP8.04□□□□□ -1.12
LIG1-209ENST00000596104 LDLRAD2Q5SZI1 272 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 C11orf87Q6NUJ2 197 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 Q6ZS46 218 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 CD177Q8N6Q3 437 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 OR8B12Q8NGG6 310 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 OTOSQ8NHW6 89 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 AQP3Q92482 292 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 VNN3Q9NY84 501 aa8.04□□□□□ -1.12
LIG1-209ENST00000596104 OR5B21A6NL26 309 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 RIIAD1A6NNX1 92 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 ODF3BA8MYP8 253 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 GLCEO94923 617 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 LYNP07948 512 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 RAB13P51153 203 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 CAPZA1P52907 286 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 DLX6P56179 175 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 LGALS4P56470 323 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 CD83Q01151 205 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 PPP1R8Q12972 351 aaKnown RBP8.03□□□□□ -1.12
LIG1-209ENST00000596104 CEACAM21Q3KPI0 293 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 PLA1AQ53H76 456 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 DMRTC1Q5HYR2 192 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 CEP78Q5JTW2 689 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 SAMD4BQ5PRF9 694 aaKnown RBP8.03□□□□□ -1.12
LIG1-209ENST00000596104 HAGHLQ6PII5 290 aaPredicted RBP8.03□□□□□ -1.12
LIG1-209ENST00000596104 ZNF782Q6ZMW2 699 aaPredicted RBP8.03□□□□□ -1.12
LIG1-209ENST00000596104 ACP7Q6ZNF0 438 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 TMEM219Q86XT9 240 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 POC1AQ8NBT0 407 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 ZNF671Q8TAW3 534 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 HIST1H2AAQ96QV6 131 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 OR5M11Q96RB7 305 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 DGCR6LQ9BY27 220 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 PRSS22Q9GZN4 317 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.03□□□□□ -1.12
LIG1-209ENST00000596104 RASL12Q9NYN1 266 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 USE1Q9NZ43 259 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 KLHDC2Q9Y2U9 406 aa8.03□□□□□ -1.12
LIG1-209ENST00000596104 TENM3Q9P273 2699 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 hCG_1809904A0A1W2PP81 198 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 A0A1W2PPE2 198 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 A0A1W2PPH5 198 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 A0A1W2PR64 198 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 A0A1W2PRV1 198 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 C17orf98A8MV24 154 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 SELENOFO60613 162 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 FAHP16930 419 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 CD33P20138 364 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 PAICSP22234 425 aaKnown RBP8.02□□□□□ -1.13
LIG1-209ENST00000596104 PRDX2P32119 198 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 MAP2K3P46734 347 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 CEBPDP49716 269 aaPredicted RBP8.02□□□□□ -1.13
LIG1-209ENST00000596104 DYNLT3P51808 116 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 BLCAPP62952 87 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 SMIM21Q3B7S5 101 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 TMEM95Q3KNT9 176 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 ZNF626Q68DY1 528 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 TRPM8Q7Z2W7 1104 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 CALHM1Q8IU99 346 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.02□□□□□ -1.13
LIG1-209ENST00000596104 PGAM4Q8N0Y7 254 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 ZNF561Q8N587 486 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 IQCF1Q8N6M8 205 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 ZNF454Q8N9F8 522 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 OR4M1Q8NGD0 313 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 OR5A2Q8NGI9 324 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 OR2T27Q8NH04 317 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 RPS4Y2Q8TD47 263 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 THEM6Q8WUY1 208 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 FOXRED1Q96CU9 486 aaPredicted RBP8.02□□□□□ -1.13
LIG1-209ENST00000596104 ZNF488Q96MN9 340 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 OCSTAMPQ9BR26 566 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 OR51V1Q9H2C8 321 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 NIPAL2Q9H841 368 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 ARGLU1Q9NWB6 273 aaPredicted RBP8.02□□□□□ -1.13
LIG1-209ENST00000596104 PITPNC1Q9UKF7 332 aa8.02□□□□□ -1.13
LIG1-209ENST00000596104 TBL2Q9Y4P3 447 aaKnown RBP8.02□□□□□ -1.13
LIG1-209ENST00000596104 A0A0U1RQV5 110 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 SLC1A7O00341 560 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms