RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 OR12D2P58182 307 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 IL13RA1P78552 427 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 ZBTB37Q5TC79 503 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 WDR25Q64LD2 544 aaPredicted RBP10.37□□□□□ -0.75
UPF1-203ENST00000594504 FDX2Q6P4F2 183 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 C9orf139Q6ZV77 190 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 THAP5Q7Z6K1 395 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 LHFPL3Q86UP9 236 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 C1orf87Q8N0U7 546 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 SYS1Q8N2H4 156 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 Q8TCH9 128 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 FBLIM1Q8WUP2 373 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 C4orf36Q96KX1 117 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 FN3KRPQ9HA64 309 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 ERVK13-1Q9NX77 482 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 CTSZQ9UBR2 303 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 CLN8Q9UBY8 286 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 SLC22A13Q9Y226 551 aa10.37□□□□□ -0.75
UPF1-203ENST00000594504 A0A1B0GTI1 187 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 DHRS7CA6NNS2 312 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 J3QLW9 94 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 P2RY10O00398 339 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 SFTPBP07988 381 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 HTR1AP08908 422 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 UBCP0CG48 685 aaKnown RBP10.36□□□□□ -0.75
UPF1-203ENST00000594504 PPIAL4GP0DN37 164 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 IRF2P14316 349 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 ZNF19P17023 458 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 CCL1P22362 96 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 PSMB10P40306 273 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 HSPA13P48723 471 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 RIPPLY1Q0D2K3 151 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 MRPL28Q13084 256 aaKnown RBP10.36□□□□□ -0.75
UPF1-203ENST00000594504 PRDX4Q13162 271 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 WDR38Q5JTN6 314 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 TREML4Q6UXN2 200 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 Q6ZSR3 168 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 ZDHHC23Q8IYP9 409 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 PRSS35Q8N3Z0 413 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 KIR3DL3Q8N743 410 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 CCDC54Q8NEL0 328 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 OR11L1Q8NGX0 322 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 OR2G2Q8NGZ5 317 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 HAVCR2Q8TDQ0 301 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 ZDHHC16Q969W1 377 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 RNF166Q96A37 237 aaPredicted RBP10.36□□□□□ -0.75
UPF1-203ENST00000594504 ITPKCQ96DU7 683 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 PELI1Q96FA3 418 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 MICU1Q9BPX6 476 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 ZNF649Q9BS31 505 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 PCGF1Q9BSM1 259 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 RTL8AQ9BWD3 113 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 ENPP5Q9UJA9 477 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 PIGLQ9Y2B2 252 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 V9GYS6 101 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 NBEAL1Q6ZS30 2694 aa10.36□□□□□ -0.75
UPF1-203ENST00000594504 A0A1B0GVI7 797 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 FAM181BA6NEQ2 426 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 EFCAB10A6NFE3 127 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 POM121CA8CG34 1229 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 ZNF850A8MQ14 1090 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 FSTL3O95633 263 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 PIPP12273 146 aaPredicted RBP10.35□□□□□ -0.75
UPF1-203ENST00000594504 FAHP16930 419 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 CPT2P23786 658 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 KIR3DL2P43630 455 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 CCR9P51686 369 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 DEFA6Q01524 100 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 MED21Q13503 144 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 ODF4Q2M2E3 257 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 LAIR2Q6ISS4 152 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 FIP1L1Q6UN15 594 aaKnown RBP10.35□□□□□ -0.75
UPF1-203ENST00000594504 IZUMO2Q6UXV1 221 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 DCDC5Q6ZRR9 648 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 ZNF826PQ6ZT77 177 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 NLRC3Q7RTR2 1065 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 OR14K1Q8NGZ2 314 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 OR5P3Q8WZ94 311 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 PIGCQ92535 297 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 TECTBQ96PL2 329 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 HIST1H2AAQ96QV6 131 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 PPP1R3EQ9H7J1 279 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 PLCXD1Q9NUJ7 323 aa10.35□□□□□ -0.75
UPF1-203ENST00000594504 CNOT2Q9NZN8 540 aaKnown RBP10.35□□□□□ -0.75
UPF1-203ENST00000594504 DIMT1Q9UNQ2 313 aaKnown RBP10.35□□□□□ -0.75
UPF1-203ENST00000594504 EXOSC1Q9Y3B2 195 aaKnown RBP10.35□□□□□ -0.75
UPF1-203ENST00000594504 RRP15Q9Y3B9 282 aaKnown RBP10.35□□□□□ -0.75
UPF1-203ENST00000594504 LOC107986453A0A1B0GWG9 222 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 A6NLC8 198 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 TMEM210A6NLX4 147 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 C3orf80F5H4A9 247 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 TNFRSF13BO14836 293 aaPredicted RBP10.34□□□□□ -0.75
UPF1-203ENST00000594504 SYT7O43581 403 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 FCN3O75636 299 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 GRPP07492 148 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 LIMS3P0CW19 117 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 LIMS4P0CW20 117 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 MYL12AP19105 171 aa10.34□□□□□ -0.75
UPF1-203ENST00000594504 NANOS3P60323 173 aaKnown RBP10.34□□□□□ -0.75
UPF1-203ENST00000594504 CSNK2BP67870 215 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms