RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 IGKV1-27A0A075B6S5 117 aa17.1■□□□□ 0.33
CLIP3-206ENST00000593074 C9orf170A2RU37 121 aa17.1■□□□□ 0.33
CLIP3-206ENST00000593074 XRCC2O43543 280 aa17.1■□□□□ 0.33
CLIP3-206ENST00000593074 ACTL6AO96019 429 aa17.1■□□□□ 0.33
CLIP3-206ENST00000593074 CFDP00746 253 aaPredicted RBP17.1■□□□□ 0.33
CLIP3-206ENST00000593074 ARF1P84077 181 aaKnown RBP17.1■□□□□ 0.33
CLIP3-206ENST00000593074 RTL6Q6ICC9 239 aa17.1■□□□□ 0.33
CLIP3-206ENST00000593074 LHFPL2Q6ZUX7 228 aa17.1■□□□□ 0.33
CLIP3-206ENST00000593074 OR8H3Q8N146 312 aa17.1■□□□□ 0.33
CLIP3-206ENST00000593074 TMEM178AQ8NBL3 297 aa17.1■□□□□ 0.33
CLIP3-206ENST00000593074 CPEB3Q8NE35 698 aaKnown RBP17.1■□□□□ 0.33
CLIP3-206ENST00000593074 SPSB4Q96A44 273 aa17.1■□□□□ 0.33
CLIP3-206ENST00000593074 ELL3Q9HB65 397 aaPredicted RBP17.1■□□□□ 0.33
CLIP3-206ENST00000593074 UBQLN2Q9UHD9 624 aa17.1■□□□□ 0.33
CLIP3-206ENST00000593074 ZNF587BE7ETH6 402 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 ARPC5O15511 151 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 EFSO43281 561 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 NOS1APO75052 506 aaPredicted RBP17.09■□□□□ 0.33
CLIP3-206ENST00000593074 EDN3P14138 238 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 HLA-GP17693 338 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 RBP2P50120 134 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 GMFBP60983 142 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 ZNF92Q03936 586 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 PPA1Q15181 289 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 CALHM2Q9HA72 323 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 FXYD6-FXYD2A0A087WZ82 144 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 RPS10-NUDT3A0A1W2PQS6 291 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 LINC00862A6NCI5 91 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 NRASP01111 189 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 TMEM225BP0DP42 221 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 AMY2BP19961 511 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 PRSS12P56730 875 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 TAS2R31P59538 309 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 SRSF6Q13247 344 aaKnown RBP17.09■□□□□ 0.33
CLIP3-206ENST00000593074 IGF2-ASQ6U949 168 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 ASCL4Q6XD76 172 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 COLCA1Q6ZS62 124 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 ADAD2Q8NCV1 583 aaKnown RBP17.09■□□□□ 0.33
CLIP3-206ENST00000593074 OR5H2Q8NGV7 314 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 MARCH1Q8TCQ1 289 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 FXYD6Q9H0Q3 95 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 METTL9Q9H1A3 318 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 DEFB127Q9H1M4 99 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 LDAHQ9H6V9 325 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 KCNN3Q9UGI6 736 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 MAB21L2Q9Y586 359 aa17.09■□□□□ 0.33
CLIP3-206ENST00000593074 TRAV14DV4A0A0A6YYC5 116 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 FAM230AA0A1W2PPH8 454 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 RFPL4AA6NLU0 287 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 RFPL4AL1F8VTS6 287 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 PPP3CBP16298 524 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 S100A11P31949 105 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 CCL11P51671 97 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 TAS2R46P59540 309 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 IL13RA1P78552 427 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 RNPS1Q15287 305 aaKnown RBP17.08■□□□□ 0.33
CLIP3-206ENST00000593074 PHB2Q99623 299 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 IRF2BPLQ9H1B7 796 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 AUP1Q9Y679 476 aa17.08■□□□□ 0.33
CLIP3-206ENST00000593074 SNU13P55769 128 aaKnown RBP17.08■□□□□ 0.32
CLIP3-206ENST00000593074 SORDQ00796 357 aa17.08■□□□□ 0.32
CLIP3-206ENST00000593074 CLLU1Q5K131 121 aa17.08■□□□□ 0.32
CLIP3-206ENST00000593074 LHFPL1Q86WI0 220 aa17.08■□□□□ 0.32
CLIP3-206ENST00000593074 BORCS8Q96FH0 119 aa17.08■□□□□ 0.32
CLIP3-206ENST00000593074 FIGNL2A6NMB9 653 aa17.07■□□□□ 0.32
CLIP3-206ENST00000593074 DUS4LO95620 317 aaKnown RBP17.07■□□□□ 0.32
CLIP3-206ENST00000593074 RPA2P15927 270 aa17.07■□□□□ 0.32
CLIP3-206ENST00000593074 RSU1Q15404 277 aa17.07■□□□□ 0.32
CLIP3-206ENST00000593074 LIN54Q6MZP7 749 aa17.07■□□□□ 0.32
CLIP3-206ENST00000593074 TMUB2Q71RG4 321 aa17.07■□□□□ 0.32
CLIP3-206ENST00000593074 TMPRSS7Q7RTY8 843 aa17.07■□□□□ 0.32
CLIP3-206ENST00000593074 APH1AQ96BI3 265 aa17.07■□□□□ 0.32
CLIP3-206ENST00000593074 TECTBQ96PL2 329 aa17.07■□□□□ 0.32
CLIP3-206ENST00000593074 ST6GALNAC5Q9BVH7 336 aa17.07■□□□□ 0.32
CLIP3-206ENST00000593074 GPR132Q9UNW8 380 aa17.07■□□□□ 0.32
CLIP3-206ENST00000593074 LIPGQ9Y5X9 500 aa17.07■□□□□ 0.32
CLIP3-206ENST00000593074 ZNF816-ZNF321PA0A0X1KG74 233 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 SPRY1O43609 319 aaPredicted RBP17.06■□□□□ 0.32
CLIP3-206ENST00000593074 ANGPTL7O43827 346 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 TNFSF10P50591 281 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 C6orf201Q7Z4U5 140 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 PEG10Q86TG7 708 aaKnown RBP17.06■□□□□ 0.32
CLIP3-206ENST00000593074 TMEM185AQ8NFB2 350 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 PRRX2Q99811 253 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 TRGV5A0A0B4J1U4 118 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 LEUTXA8MZ59 168 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 CSTBP04080 98 aaKnown RBP17.06■□□□□ 0.32
CLIP3-206ENST00000593074 COX5BP10606 129 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 AKR1C4P17516 323 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 GABRR1P24046 479 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 OR3A3P47888 321 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 FGL1Q08830 312 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 HLXQ14774 488 aaPredicted RBP17.06■□□□□ 0.32
CLIP3-206ENST00000593074 C3AR1Q16581 482 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 TMEM128Q5BJH2 165 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 SIGIRRQ6IA17 410 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 C3P1Q6ZMU1 363 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 MCEMP1Q8IX19 187 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 CSNK2A3Q8NEV1 391 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 CITED4Q96RK1 184 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms