RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 AADACL4Q5VUY2 407 aa13.4□□□□□ -0.26
CIRBP-241ENST00000593048 ZNF367Q7RTV3 350 aa13.4□□□□□ -0.26
CIRBP-241ENST00000593048 FAM90A1Q86YD7 464 aa13.4□□□□□ -0.26
CIRBP-241ENST00000593048 FTMTQ8N4E7 242 aa13.4□□□□□ -0.26
CIRBP-241ENST00000593048 GCSAMQ8N6F7 178 aa13.4□□□□□ -0.26
CIRBP-241ENST00000593048 THEM6Q8WUY1 208 aa13.4□□□□□ -0.26
CIRBP-241ENST00000593048 LRRC29Q8WV35 223 aa13.4□□□□□ -0.26
CIRBP-241ENST00000593048 RNF133Q8WVZ7 376 aa13.4□□□□□ -0.26
CIRBP-241ENST00000593048 CHCHD3Q9NX63 227 aaKnown RBP13.4□□□□□ -0.26
CIRBP-241ENST00000593048 WARS2Q9UGM6 360 aaKnown RBP13.4□□□□□ -0.26
CIRBP-241ENST00000593048 DIMT1Q9UNQ2 313 aaKnown RBP13.4□□□□□ -0.26
CIRBP-241ENST00000593048 ERGIC3Q9Y282 383 aa13.4□□□□□ -0.26
CIRBP-241ENST00000593048 CCDC160A6NGH7 325 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 SLC22A31A6NKX4 558 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 TNFRSF13BO14836 293 aaPredicted RBP13.39□□□□□ -0.27
CIRBP-241ENST00000593048 MT-ND2P03891 347 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 CRYBA1P05813 215 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 HTR1FP30939 366 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 NAA10P41227 235 aaPredicted RBP13.39□□□□□ -0.27
CIRBP-241ENST00000593048 ZNF91Q05481 1191 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 CNPY1Q3B7I2 92 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 KLHL12Q53G59 568 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 RUSC1-AS1Q66K80 236 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 BTN2A1Q7KYR7 527 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 ANKRD13BQ86YJ7 626 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 CSNK2A3Q8NEV1 391 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 OR1M1Q8NGA1 313 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 GATAD2BQ8WXI9 593 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 ST8SIA4Q92187 359 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 TAF15Q92804 592 aaKnown RBP eCLIP13.39□□□□□ -0.27
CIRBP-241ENST00000593048 WDFY2Q96P53 400 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 MICU1Q9BPX6 476 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 PAPOLGQ9BWT3 736 aaKnown RBP13.39□□□□□ -0.27
CIRBP-241ENST00000593048 SMURF1Q9HCE7 757 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 ISYNA1Q9NPH2 558 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 NOX4Q9NPH5 578 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 INPP5EQ9NRR6 644 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 HAO2Q9NYQ3 351 aa13.39□□□□□ -0.27
CIRBP-241ENST00000593048 EXOSC1Q9Y3B2 195 aaKnown RBP13.39□□□□□ -0.27
CIRBP-241ENST00000593048 hCG_38984A0A1B0GV85 526 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 ANXA2P2A6NMY6 339 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 POM121CA8CG34 1229 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 SRRM5B3KS81 715 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 DVL1O14640 695 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 ECDO95905 644 aaPredicted RBP13.38□□□□□ -0.27
CIRBP-241ENST00000593048 LHBP01229 141 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 OMGP23515 440 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 OPRL1P41146 370 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 GSK3AP49840 483 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 ARF6P62330 175 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 TIMM50Q3ZCQ8 353 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 TEX36Q5VZQ5 186 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 PLBD1Q6P4A8 553 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 RHOUQ7L0Q8 258 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 CLVS1Q8IUQ0 354 aaPredicted RBP13.38□□□□□ -0.27
CIRBP-241ENST00000593048 TIGD4Q8IY51 512 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 LHX4Q969G2 390 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 TMIGD2Q96BF3 282 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 AMELYQ99218 206 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 MND1Q9BWT6 205 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 RGCCQ9H4X1 137 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 RHBDD3Q9Y3P4 386 aa13.38□□□□□ -0.27
CIRBP-241ENST00000593048 CDIPTO14735 213 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 MUC1P15941 1255 aaPredicted RBP13.37□□□□□ -0.27
CIRBP-241ENST00000593048 MYL12AP19105 171 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 RPS7P62081 194 aaKnown RBP13.37□□□□□ -0.27
CIRBP-241ENST00000593048 PDCD1Q15116 288 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 SLC35D3Q5M8T2 416 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 Q6YL49 198 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 LINC00299Q6ZSB3 139 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 PRSS45Q7RTY3 260 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 SLC36A1Q7Z2H8 476 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 C11orf53Q8IXP5 236 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 ZNF454Q8N9F8 522 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 SCCPDHQ8NBX0 429 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 OTOSQ8NHW6 89 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 ISOC1Q96CN7 298 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 FAM71F1Q96KD3 344 aaPredicted RBP13.37□□□□□ -0.27
CIRBP-241ENST00000593048 TBX15Q96SF7 602 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 TSC22D3Q99576 134 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 CCL13Q99616 98 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 KAAG1Q9UBP8 84 aa13.37□□□□□ -0.27
CIRBP-241ENST00000593048 EXOGQ9Y2C4 368 aaKnown RBP13.37□□□□□ -0.27
CIRBP-241ENST00000593048 MEGF8Q7Z7M0 2845 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 CENPVL3A0A0U1RRI6 287 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 FAM181BA6NEQ2 426 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 SLC22A1O15245 554 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 SELENOFO60613 162 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 MMP9P14780 707 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 MDKP21741 143 aaPredicted RBP13.36□□□□□ -0.27
CIRBP-241ENST00000593048 GMFBP60983 142 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 C11orf91Q3C1V1 193 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 FIP1L1Q6UN15 594 aaKnown RBP13.36□□□□□ -0.27
CIRBP-241ENST00000593048 WDR82Q6UXN9 313 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 GDPGP1Q6ZNW5 385 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 MEPCEQ7L2J0 689 aaKnown RBP13.36□□□□□ -0.27
CIRBP-241ENST00000593048 WDR86Q86TI4 376 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 CPOQ8IVL8 374 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 RTL8AQ9BWD3 113 aa13.36□□□□□ -0.27
CIRBP-241ENST00000593048 PRDM13Q9H4Q3 707 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms