RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 ARF6P62330 175 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 TMED1Q13445 227 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 TP53I3Q53FA7 332 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 LRRC10Q5BKY1 277 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 CLVS2Q5SYC1 327 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 FAM220AQ7Z4H9 259 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 OR5A2Q8NGI9 324 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 OR14K1Q8NGZ2 314 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 AQP3Q92482 292 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 H1FXQ92522 213 aaKnown RBP12.56□□□□□ -0.4
ERCC1-213ENST00000592023 TMIGD2Q96BF3 282 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 HRASLS5Q96KN8 279 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 GAFA1Q96PS6 74 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 MBOAT4Q96T53 435 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 PLEKHA1Q9HB21 404 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 ACOXLQ9NUZ1 547 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 ONECUT1Q9UBC0 465 aa12.56□□□□□ -0.4
ERCC1-213ENST00000592023 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.56□□□□□ -0.4
ERCC1-213ENST00000592023 A0A1B0GVI7 797 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 OR2AT4A6NND4 320 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 GABRA2P47869 451 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 IL13RA1P78552 427 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 ZNF85Q03923 595 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 DGUOKQ16854 277 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 DEFB112Q30KQ8 113 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 TMEM42Q69YG0 159 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 ZNF788Q6ZQV5 615 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 CATSPERDQ86XM0 798 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 ANGPTL6Q8NI99 470 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 RORBQ92753 470 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 RNFT2Q96EX2 444 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 ZNF488Q96MN9 340 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 DNTTIP1Q9H147 329 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 ZMAT3Q9HA38 289 aaKnown RBP12.55□□□□□ -0.4
ERCC1-213ENST00000592023 S100A14Q9HCY8 104 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 GNG8Q9UK08 70 aa12.55□□□□□ -0.4
ERCC1-213ENST00000592023 TMEM89A2RUT3 159 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 DLGAP1O14490 977 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 SULT1C4O75897 302 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 CCL1P22362 96 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 HAAOP46952 286 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 TGM4P49221 684 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 C11orf91Q3C1V1 193 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 ATPAF1Q5TC12 328 aaPredicted RBP12.54□□□□□ -0.4
ERCC1-213ENST00000592023 PDZD9Q8IXQ8 264 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 C10orf67Q8IYJ2 551 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 BATF2Q8N1L9 274 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 PQLC1Q8N2U9 271 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 ZNF671Q8TAW3 534 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 TRMT10AQ8TBZ6 339 aaKnown RBP12.54□□□□□ -0.4
ERCC1-213ENST00000592023 NPRL2Q8WTW4 380 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 TRUB1Q8WWH5 349 aaKnown RBP12.54□□□□□ -0.4
ERCC1-213ENST00000592023 LHX4Q969G2 390 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 ZDHHC16Q969W1 377 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 C9orf16Q9BUW7 83 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 ELL3Q9HB65 397 aaPredicted RBP12.54□□□□□ -0.4
ERCC1-213ENST00000592023 SLC25A10Q9UBX3 287 aaPredicted RBP12.54□□□□□ -0.4
ERCC1-213ENST00000592023 AASSQ9UDR5 926 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 GMPPBQ9Y5P6 360 aa12.54□□□□□ -0.4
ERCC1-213ENST00000592023 IGKV1D-17A0A075B6S4 117 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 CENPVL3A0A0U1RRI6 287 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 LOC107986453A0A1B0GWG9 222 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 PQLC2LA1A4F0 135 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 ANKRD61A6NGH8 418 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 DHRS7CA6NNS2 312 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 J3QT63 122 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 SIGLEC5O15389 551 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
ERCC1-213ENST00000592023 SYT7O43581 403 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 SYNGR1O43759 233 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 RNASE1P07998 156 aaKnown RBP12.53□□□□□ -0.4
ERCC1-213ENST00000592023 PSG2P11465 335 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 NDUFB7P17568 137 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 CFPP27918 469 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 KIR3DL2P43630 455 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 COMPP49747 757 aaPredicted RBP12.53□□□□□ -0.4
ERCC1-213ENST00000592023 SNRPGP62308 76 aaKnown RBP12.53□□□□□ -0.4
ERCC1-213ENST00000592023 ACTC1P68032 377 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 ACTA1P68133 377 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 PDCD1Q15116 288 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 SLC9A3R2Q15599 337 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 CDONQ4KMG0 1287 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 Q6ZSR3 168 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 VMO1Q7Z5L0 202 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 ZNF573Q86YE8 665 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 PRSS35Q8N3Z0 413 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 POC1AQ8NBT0 407 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 TMEM185AQ8NFB2 350 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 GATAD2BQ8WXI9 593 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 SLC25A28Q96A46 364 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 MED30Q96HR3 178 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 DCTN5Q9BTE1 182 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 CNTD2Q9H8S5 307 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 SIRT7Q9NRC8 400 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 ZNF222Q9UK12 451 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 KPTNQ9Y664 436 aa12.53□□□□□ -0.4
ERCC1-213ENST00000592023 IGHV1-69DA0A0B4J2H0 117 aa12.52□□□□□ -0.41
ERCC1-213ENST00000592023 DAPL1A0PJW8 107 aa12.52□□□□□ -0.41
ERCC1-213ENST00000592023 E9PQ18 207 aa12.52□□□□□ -0.41
ERCC1-213ENST00000592023 GPR37O15354 613 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms