RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 NEK6Q9HC98 313 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 SNTG1Q9NSN8 517 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 ERVK13-1Q9NX77 482 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 MYRFQ9Y2G1 1151 aa8.41□□□□□ -1.06
BRCA1-227ENST00000591849 MALRD1Q5VYJ5 2156 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 DHRS7CA6NNS2 312 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 RNF212BA8MTL3 300 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 A8MXK9 166 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 SRRM5B3KS81 715 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 H0YAE9 185 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 J3QRE1 110 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 CASQ2O14958 399 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-227ENST00000591849 ENSAO43768 121 aaKnown RBP8.4□□□□□ -1.06
BRCA1-227ENST00000591849 RPSAP08865 295 aaKnown RBP8.4□□□□□ -1.06
BRCA1-227ENST00000591849 ADRA2CP18825 462 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 CCL1P22362 96 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 DCKP27707 260 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 CFHR2P36980 270 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 KIR3DL2P43630 455 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 CAPZA1P52907 286 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 MRPL28Q13084 256 aaKnown RBP8.4□□□□□ -1.06
BRCA1-227ENST00000591849 IKZF1Q13422 519 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 ALKBH1Q13686 389 aaKnown RBP8.4□□□□□ -1.06
BRCA1-227ENST00000591849 CNN3Q15417 329 aaKnown RBP8.4□□□□□ -1.06
BRCA1-227ENST00000591849 LRRC10Q5BKY1 277 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 TEX36Q5VZQ5 186 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 C1QL2Q7Z5L3 287 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 FAM90A1Q86YD7 464 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 EGFL6Q8IUX8 553 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 SYS1Q8N2H4 156 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 PRSS35Q8N3Z0 413 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 BPIFB2Q8N4F0 458 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 OR5T2Q8NGG2 359 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 OR13C3Q8NGS6 347 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF418Q8TF45 676 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-227ENST00000591849 NPRL2Q8WTW4 380 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 FGGYQ96C11 551 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 C12orf43Q96C57 262 aaKnown RBP8.4□□□□□ -1.06
BRCA1-227ENST00000591849 C10orf35Q96D05 121 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 BORCS8Q96FH0 119 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 MED30Q96HR3 178 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 TLNRD1Q9H1K6 362 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 FRRS1LQ9P0K9 344 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 NLKQ9UBE8 527 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 HHLA2Q9UM44 414 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 POLDIP2Q9Y2S7 368 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 POLR3KQ9Y2Y1 108 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-227ENST00000591849 INSIG2Q9Y5U4 225 aa8.4□□□□□ -1.06
BRCA1-227ENST00000591849 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.4□□□□□ -1.073e-7■■■■■ 41.1
BRCA1-227ENST00000591849 IGHV2-70DA0A0C4DH43 119 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 KIR2DS1A0A191URI9 304 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 J3QT63 122 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 DVL1O14640 695 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 TCF21O43680 179 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 WBP4O75554 376 aaKnown RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 RHBDL1O75783 438 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 NXPH2O95156 264 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 ECDO95905 644 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 CYB5AP00167 134 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 AVPP01185 164 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 LIPFP07098 398 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 CCDC159P0C7I6 412 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 EPHA1P21709 976 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 CCR9P51686 369 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 FUT6P51993 359 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 ATP1B3P54709 279 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 ISL1P61371 349 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 ADARB1P78563 741 aaKnown RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 FAM76BQ5HYJ3 339 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 FDX2Q6P4F2 183 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 RBMS3Q6XE24 437 aaKnown RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 KRT74Q7RTS7 529 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 PNLDC1Q8NA58 520 aaKnown RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 HAVCR2Q8TDQ0 301 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 APH1BQ8WW43 257 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 PP6455Q8WZ26 134 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 TMEM158Q8WZ71 300 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 AQP3Q92482 292 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 H1FXQ92522 213 aaKnown RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 SEH1LQ96EE3 360 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 PELI1Q96FA3 418 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 TMEM80Q96HE8 168 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 FGF23Q9GZV9 251 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 WDR13Q9H1Z4 485 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 VCX3BQ9H321 246 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 ISG20L2Q9H9L3 353 aaKnown RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 FGF20Q9NP95 211 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 MRPS18AQ9NVS2 196 aaKnown RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 RASL12Q9NYN1 266 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 NKX1-2Q9UD57 310 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 EXOSC1Q9Y3B2 195 aaKnown RBP8.39□□□□□ -1.07
BRCA1-227ENST00000591849 HSPE1-MOB4S4R3N1 261 aa8.39□□□□□ -1.07
BRCA1-227ENST00000591849 TRBV2A0A0J9YWF9 115 aa8.38□□□□□ -1.07
BRCA1-227ENST00000591849 EFCAB10A6NFE3 127 aa8.38□□□□□ -1.07
BRCA1-227ENST00000591849 TMEM212A6NML5 194 aa8.38□□□□□ -1.07
BRCA1-227ENST00000591849 OR2AT4A6NND4 320 aa8.38□□□□□ -1.07
BRCA1-227ENST00000591849 RGS9O75916 674 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-227ENST00000591849 INMTO95050 263 aa8.38□□□□□ -1.07
BRCA1-227ENST00000591849 PLATP00750 562 aa8.38□□□□□ -1.07
BRCA1-227ENST00000591849 IGHA1P01876 353 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms