RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 DOK3Q7L591 496 aa16.91■□□□□ 0.3
SPHK1-207ENST00000590959 TMEM229BQ8NBD8 167 aa16.91■□□□□ 0.3
SPHK1-207ENST00000590959 OR52H1Q8NGJ2 320 aa16.91■□□□□ 0.3
SPHK1-207ENST00000590959 TNFAIP8L1Q8WVP5 186 aa16.91■□□□□ 0.3
SPHK1-207ENST00000590959 FGGYQ96C11 551 aa16.91■□□□□ 0.3
SPHK1-207ENST00000590959 TAS2R4Q9NYW5 299 aa16.91■□□□□ 0.3
SPHK1-207ENST00000590959 ATPIF1Q9UII2 106 aa16.91■□□□□ 0.3
SPHK1-207ENST00000590959 A0A0U1RQV5 110 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 H3BUI4 141 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 RLN1P04808 185 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 GTF2F2P13984 249 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 PTGER4P35408 488 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 KRTAP27-1Q3LI81 207 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 CLVS2Q5SYC1 327 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 PDZD9Q8IXQ8 264 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 CNEP1R1Q8N9A8 125 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 SLC25A32Q9H2D1 315 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 A0A0D9SG52 128 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 RFPL4AA6NLU0 287 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 RFPL4AL1F8VTS6 287 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 ATXN7O15265 892 aaPredicted RBP16.9■□□□□ 0.3
SPHK1-207ENST00000590959 LMX1BO60663 402 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 WDR1O75083 606 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 CNOT4O95628 575 aaKnown RBP16.9■□□□□ 0.3
SPHK1-207ENST00000590959 IL18BPO95998 194 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 ITGA5P08648 1049 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 UBBP0CG47 229 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 CD37P11049 281 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 ABOP16442 354 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 ANOS1P23352 680 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 KIR2DL2P43627 348 aaPredicted RBP16.9■□□□□ 0.3
SPHK1-207ENST00000590959 POU3F4P49335 361 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 RPS27AP62979 156 aaKnown RBP16.9■□□□□ 0.3
SPHK1-207ENST00000590959 UBA52P62987 128 aaKnown RBP16.9■□□□□ 0.3
SPHK1-207ENST00000590959 GFOD2Q3B7J2 385 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 SFRP5Q5T4F7 317 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 FAM166AQ6J272 317 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 DPPA2Q7Z7J5 298 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 OR1K1Q8NGR3 316 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 GPX8Q8TED1 209 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 PTX4Q96A99 478 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 FAM3DQ96BQ1 224 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 ARL6Q9H0F7 186 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 OR10A2Q9H208 303 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 SHANK1Q9Y566 2161 aa16.9■□□□□ 0.3
SPHK1-207ENST00000590959 MBD3L4A6NDZ8 208 aaPredicted RBP16.89■□□□□ 0.29
SPHK1-207ENST00000590959 MBD3L3A6NE82 208 aaPredicted RBP16.89■□□□□ 0.29
SPHK1-207ENST00000590959 MBD3L5A6NJ08 208 aaPredicted RBP16.89■□□□□ 0.29
SPHK1-207ENST00000590959 FIGNL2A6NMB9 653 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 ARPC5O15511 151 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 IGLV3-1P01715 115 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 HLA-HP01893 362 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 LPLP06858 475 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 FGF2P09038 288 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 ARR3P36575 388 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 ZMYND11Q15326 602 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 STEAP1BQ6NZ63 245 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 OR5D14Q8NGL3 314 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 OR1J2Q8NGS2 313 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 MBD3L2Q8NHZ7 208 aaPredicted RBP16.89■□□□□ 0.29
SPHK1-207ENST00000590959 FAM71F1Q96KD3 344 aaPredicted RBP16.89■□□□□ 0.29
SPHK1-207ENST00000590959 SHARPINQ9H0F6 387 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 DNTTIP1Q9H147 329 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 NBASA2RRP1 2371 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 FREM1Q5H8C1 2179 aa16.89■□□□□ 0.29
SPHK1-207ENST00000590959 E9PLN8 166 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 ZNF20P17024 532 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 GNALP38405 381 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 SRSF4Q08170 494 aaKnown RBP16.88■□□□□ 0.29
SPHK1-207ENST00000590959 CPEB3Q8NE35 698 aaKnown RBP16.88■□□□□ 0.29
SPHK1-207ENST00000590959 ADAT3Q96EY9 351 aaPredicted RBP16.88■□□□□ 0.29
SPHK1-207ENST00000590959 MED12LQ86YW9 2145 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 TRAV18A0A075B6X5 111 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 GOSR2O14653 212 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 CD79AP11912 226 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 ZNF35P13682 527 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 TGFBR3Q03167 851 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 FAAP20Q6NZ36 180 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 Q6ZT83 130 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 NKAIN3Q8N8D7 197 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 PLPP7Q8NBV4 271 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 CCDC54Q8NEL0 328 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 OR51D1Q8NGF3 324 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 NANOS1Q8WY41 292 aaKnown RBP16.88■□□□□ 0.29
SPHK1-207ENST00000590959 SOX7Q9BT81 388 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 TMEM138Q9NPI0 162 aa16.88■□□□□ 0.29
SPHK1-207ENST00000590959 RP1L1Q8IWN7 2480 aaPredicted RBP16.87■□□□□ 0.29
SPHK1-207ENST00000590959 C5orf63A6NC05 138 aa16.87■□□□□ 0.29
SPHK1-207ENST00000590959 SCO1O75880 301 aa16.87■□□□□ 0.29
SPHK1-207ENST00000590959 PRB1P04280 392 aa16.87■□□□□ 0.29
SPHK1-207ENST00000590959 TMIGD3P0DMS9 266 aaPredicted RBP16.87■□□□□ 0.29
SPHK1-207ENST00000590959 COX5BP10606 129 aa16.87■□□□□ 0.29
SPHK1-207ENST00000590959 MGMTP16455 207 aa16.87■□□□□ 0.29
SPHK1-207ENST00000590959 H2BFSP57053 126 aa16.87■□□□□ 0.29
SPHK1-207ENST00000590959 HGFACQ04756 655 aa16.87■□□□□ 0.29
SPHK1-207ENST00000590959 SNAI3Q3KNW1 292 aa16.87■□□□□ 0.29
SPHK1-207ENST00000590959 C2orf76Q3KRA6 126 aa16.87■□□□□ 0.29
SPHK1-207ENST00000590959 FAM122CQ6P4D5 195 aa16.87■□□□□ 0.29
SPHK1-207ENST00000590959 C11orf88Q6PI97 169 aa16.87■□□□□ 0.29
SPHK1-207ENST00000590959 CD163Q86VB7 1156 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms