RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 SERPINA3P01011 423 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 CCDC159P0C7I6 412 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 FAM157CP0CG43 387 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 EGR1P18146 543 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 ZFP36P26651 326 aaKnown RBP9.94□□□□□ -0.82
LIG3-213ENST00000590630 CD80P33681 288 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 HSPA13P48723 471 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 PITPNBP48739 271 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 TGM4P49221 684 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 ETV1P50549 477 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 SEC61A1P61619 476 aaKnown RBP9.94□□□□□ -0.82
LIG3-213ENST00000590630 GNB2P62879 340 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 HOXA4Q00056 320 aaPredicted RBP9.94□□□□□ -0.82
LIG3-213ENST00000590630 ST3GAL4Q11206 333 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 CCDC58Q4VC31 144 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 DCAF12L2Q5VW00 463 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 LAIR2Q6ISS4 152 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 FAM90A1Q86YD7 464 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 ZNF573Q86YE8 665 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 TEX29Q8N6K0 151 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 ZNF676Q8N7Q3 588 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 ZNF671Q8TAW3 534 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 GGHQ92820 318 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 COMMD4Q9H0A8 199 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 GPR173Q9NS66 373 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 CHCHD3Q9NX63 227 aaKnown RBP9.94□□□□□ -0.82
LIG3-213ENST00000590630 OR5V1Q9UGF6 321 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 PSORS1C1Q9UIG5 152 aa9.94□□□□□ -0.82
LIG3-213ENST00000590630 PQLC2LA1A4F0 135 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 KIAA1324LA8MWY0 1029 aaPredicted RBP9.93□□□□□ -0.82
LIG3-213ENST00000590630 E9PI62 339 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 H3BSH0 61 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.93□□□□□ -0.82
LIG3-213ENST00000590630 TNFRSF13BO14836 293 aaPredicted RBP9.93□□□□□ -0.82
LIG3-213ENST00000590630 PHF1O43189 567 aaPredicted RBP9.93□□□□□ -0.82
LIG3-213ENST00000590630 XPNPEP2O43895 674 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 ZFPL1O95159 310 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 ZNF20P17024 532 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 SRD5A1P18405 259 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 NPY4RP50391 375 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 DMRTC1Q5HYR2 192 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 FAHD2BQ6P2I3 314 aaPredicted RBP9.93□□□□□ -0.82
LIG3-213ENST00000590630 HAGHLQ6PII5 290 aaPredicted RBP9.93□□□□□ -0.82
LIG3-213ENST00000590630 OR52N1Q8NH53 320 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 OR5AK2Q8NH90 309 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 AQP3Q92482 292 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 FAHD2AQ96GK7 314 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 ERVK-18Q9QC07 812 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 KAAG1Q9UBP8 84 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 CLN8Q9UBY8 286 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 SLC7A11Q9UPY5 501 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 POLDIP2Q9Y2S7 368 aa9.93□□□□□ -0.82
LIG3-213ENST00000590630 TRBV2A0A0J9YWF9 115 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 J3QT63 122 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 AKR7A2O43488 359 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 ADAM20O43506 726 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 RHBDL1O75783 438 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 GYPAP02724 150 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 HAAOP46952 286 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 FUT6P51993 359 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 CNN3Q15417 329 aaKnown RBP9.92□□□□□ -0.82
LIG3-213ENST00000590630 UBE2V2Q15819 145 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 C11orf91Q3C1V1 193 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 OR2G6Q5TZ20 316 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 RPL22L1Q6P5R6 122 aaKnown RBP9.92□□□□□ -0.82
LIG3-213ENST00000590630 LYPD2Q6UXB3 125 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 IZUMO2Q6UXV1 221 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 ZNF841Q6ZN19 808 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 IL17RELQ6ZVW7 336 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 AHSA2Q719I0 299 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 UTS2BQ765I0 119 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 STX19Q8N4C7 294 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 BPIFB6Q8NFQ5 453 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 OR51A4Q8NGJ6 313 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 OR13C3Q8NGS6 347 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 ADAT3Q96EY9 351 aaPredicted RBP9.92□□□□□ -0.82
LIG3-213ENST00000590630 PDCD1LG2Q9BQ51 273 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 ANKRD60Q9BZ19 345 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 DNTTIP1Q9H147 329 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 BABAM2Q9NXR7 383 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 RASL12Q9NYN1 266 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 DNAJB11Q9UBS4 358 aa9.92□□□□□ -0.82
LIG3-213ENST00000590630 IGHV3OR15-7A0A075B7D8 119 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 FAM230AA0A1W2PPH8 454 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 TRAPPC2LH3BP13 241 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 SLC1A7O00341 560 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 TMPRSS2O15393 492 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 IFNA2P01563 188 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 MYF6P23409 242 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 GLRA1P23415 457 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 MPZP25189 248 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 GTF2A1P52655 376 aaPredicted RBP9.91□□□□□ -0.82
LIG3-213ENST00000590630 CDK5R1Q15078 307 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 KRTAP21-3Q3LHN1 58 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 C6orf141Q5SZD1 244 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 ATPAF1Q5TC12 328 aaPredicted RBP9.91□□□□□ -0.82
LIG3-213ENST00000590630 WDR25Q64LD2 544 aaPredicted RBP9.91□□□□□ -0.82
LIG3-213ENST00000590630 STUMQ69YW2 141 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 SLC36A1Q7Z2H8 476 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 DNAAF1Q8NEP3 725 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms