RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 RPL3LQ92901 407 aaKnown RBP9.31□□□□□ -0.92
SMAD4-211ENST00000590499 KAAG1Q9UBP8 84 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 CLN8Q9UBY8 286 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 AASSQ9UDR5 926 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 SLC22A13Q9Y226 551 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 GMPPBQ9Y5P6 360 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 V9GYS6 101 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 IGHV3OR15-7A0A075B7D8 119 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 KIR2DS1A0A191URI9 304 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 METTL15A6NJ78 407 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 DHRS7CA6NNS2 312 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 SLC16A6O15403 523 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 NDUFA2O43678 99 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 TCF21O43680 179 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 GYPAP02724 150 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 PPIAL4GP0DN37 164 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 MUC1P15941 1255 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-211ENST00000590499 AMY2BP19961 511 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 NPY4RP50391 375 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 GPM6AP51674 278 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 GNG3P63215 75 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 ELF3P78545 371 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-211ENST00000590499 SCGB2A2Q13296 93 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 ZSCAN26Q16670 478 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 CEACAM21Q3KPI0 293 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 COMMD2Q86X83 199 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 YIPF7Q8N8F6 280 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 SCCPDHQ8NBX0 429 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 OR14K1Q8NGZ2 314 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 RHOXF1Q8NHV9 184 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 SPATA3Q8NHX4 192 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 C12orf43Q96C57 262 aaKnown RBP9.3□□□□□ -0.92
SMAD4-211ENST00000590499 SEH1LQ96EE3 360 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 RNFT2Q96EX2 444 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 RNF170Q96K19 258 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 OR51I2Q9H344 312 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 SMURF1Q9HCE7 757 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 MBNL3Q9NUK0 354 aaKnown RBP9.3□□□□□ -0.92
SMAD4-211ENST00000590499 ACOXLQ9NUZ1 547 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 FAM118AQ9NWS6 357 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 ENPP5Q9UJA9 477 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 PIGLQ9Y2B2 252 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 EXOGQ9Y2C4 368 aaKnown RBP9.3□□□□□ -0.92
SMAD4-211ENST00000590499 AUP1Q9Y679 476 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 TENM1Q9UKZ4 2725 aa9.3□□□□□ -0.92
SMAD4-211ENST00000590499 A0A0A6YYJ9 748 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 LOC100130705A0A1B0GUX0 176 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 A0A1B0GW55 424 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 OR5B21A6NL26 309 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 ZNF732B4DXR9 585 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 P2RY10O00398 339 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 ADAM20O43506 726 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 MTRF1O75570 445 aaKnown RBP9.29□□□□□ -0.92
SMAD4-211ENST00000590499 RPP14O95059 124 aaKnown RBP9.29□□□□□ -0.92
SMAD4-211ENST00000590499 BAG2O95816 211 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 RNASE1P07998 156 aaKnown RBP9.29□□□□□ -0.92
SMAD4-211ENST00000590499 DUX4L2P0CJ85 424 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 DUX4L3P0CJ86 424 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 DUX4L4P0CJ87 422 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 DUX4L5P0CJ88 424 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 DUX4L6P0CJ89 424 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 DUX4L7P0CJ90 424 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 ATP6V1E1P36543 226 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 ACTC1P68032 377 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 ACTA1P68133 377 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 ZNF91Q05481 1191 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 MICBQ29980 383 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 CDONQ4KMG0 1287 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 TP53I3Q53FA7 332 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 WDR38Q5JTN6 314 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 CEP78Q5JTW2 689 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 STUMQ69YW2 141 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 DUX4L9Q6RFH8 374 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-211ENST00000590499 USP43Q70EL4 1123 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 DOK3Q7L591 496 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 THAP5Q7Z6K1 395 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 PRSS35Q8N3Z0 413 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 OR5A2Q8NGI9 324 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 APH1BQ8WW43 257 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 STMN2Q93045 179 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 UPRTQ96BW1 309 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 LGALS12Q96DT0 336 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 RDH12Q96NR8 316 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 MRI1Q9BV20 369 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 WDR13Q9H1Z4 485 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 DUX4Q9UBX2 424 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 GTF2A1LQ9UNN4 478 aa9.29□□□□□ -0.92
SMAD4-211ENST00000590499 MPZL2O60487 215 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 RHBDL1O75783 438 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 VENTXO95231 258 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 NRASP01111 189 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 DBTP11182 482 aaKnown RBP9.28□□□□□ -0.92
SMAD4-211ENST00000590499 KIR3DL2P43630 455 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 HILS1P60008 231 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 DMRTC1Q5HYR2 192 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 CLVS2Q5SYC1 327 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 ATPAF1Q5TC12 328 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-211ENST00000590499 PLCXD3Q63HM9 321 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 BTNL3Q6UXE8 466 aa9.28□□□□□ -0.92
SMAD4-211ENST00000590499 KCTD8Q6ZWB6 473 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms