RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-228	ENST00000590347	TRAPPC6A	O75865	159 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	CSTA	P01040	98 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	BCKDHB	P21953	392 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	POLR2H	P52434	150 aa	Known RBP	13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	VHLL	Q6RSH7	139 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	ZNF66	Q6ZN08	573 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	BEND2	Q8NDZ0	799 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	OR5T1	Q8NG75	326 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	NEK7	Q8TDX7	302 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	KTI12	Q96EK9	354 aa	Predicted RBP	13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	TVP23C	Q96ET8	276 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	SHD	Q96IW2	340 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	LMF2	Q9BU23	707 aa	Known RBP	13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	ZNF701	Q9NV72	531 aa	Predicted RBP	13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	LAMP3	Q9UQV4	416 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	BRWD1	Q9NSI6	2320 aa		13.41	□□□□□ -0.26
CIRBP-228	ENST00000590347	TLCD2	A6NGC4	264 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	FTCDNL1	E5RQL4	147 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	AQP7	O14520	342 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	CEACAM1	P13688	526 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	MAS1L	P35410	378 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	GLIPR1	P48060	266 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	TAS2R31	P59538	309 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	RPS4X	P62701	263 aa	Known RBP	13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	GNB2	P62879	340 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	VAMP2	P63027	116 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	EGR3	Q06889	387 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	TOMM20	Q15388	145 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	SLC22A25	Q6T423	547 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	OR1P1	Q8NH06	330 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	SDSL	Q96GA7	329 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	ARHGAP5-AS1	Q96IT6	56 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	SERINC2	Q96SA4	455 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	ADO	Q96SZ5	270 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	AK3	Q9UIJ7	227 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	LRP12	Q9Y561	859 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	ZNF264	O43296	627 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	DEDD	O75618	318 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	RPS4Y1	P22090	263 aa	Known RBP	13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	ZIC1	Q15915	447 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	HIKESHI	Q53FT3	197 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	COMMD2	Q86X83	199 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	TMEM183A	Q8IXX5	376 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	OTOS	Q8NHW6	89 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	CXorf40A	Q8TE69	158 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	ANKRD9	Q96BM1	317 aa	Predicted RBP	13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	DNAJC4	Q9NNZ3	241 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	CHST11	Q9NPF2	352 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	HIF3A	Q9Y2N7	669 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	SDK1	Q7Z5N4	2213 aa		13.4	□□□□□ -0.26
CIRBP-228	ENST00000590347	IGKV1D-42	A0A075B6H8	117 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	SYT7	O43581	403 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	APBB3	O95704	486 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	ONECUT2	O95948	504 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	SLC37A1	P57057	533 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	MAJIN	Q3KP22	176 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	CBLN3	Q6UW01	205 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	SGPP2	Q8IWX5	399 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	OR52E1	Q8NGJ3	308 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	R3HDM4	Q96D70	268 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	FAHD2A	Q96GK7	314 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	RBM18	Q96H35	190 aa	Known RBP	13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	C5orf34	Q96MH7	638 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	LPAR2	Q9HBW0	351 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	GNG13	Q9P2W3	67 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	PITPNC1	Q9UKF7	332 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	DOCK11	Q5JSL3	2073 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347		A0A1W2PR80	420 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	DVL1	O14640	695 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	ARPC3	O15145	178 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	LYL1	P12980	280 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	CEACAM8	P31997	349 aa	Predicted RBP	13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	CEACAM6	P40199	344 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	IDH3G	P51553	393 aa	Predicted RBP	13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	RPL23A	P62750	156 aa	Known RBP	13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	GPM6B	Q13491	265 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	THEM4	Q5T1C6	240 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	CST9LP1	Q5W188	147 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	VN1R4	Q7Z5H5	301 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	ADGRG7	Q96K78	797 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	OR8B4	Q96RC9	309 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	MAGT1	Q9H0U3	335 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	OR51B6	Q9H340	312 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	FOXJ2	Q9P0K8	574 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	SLC7A11	Q9UPY5	501 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	MEMO1	Q9Y316	297 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	CST2	P09228	141 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	FGF5	P12034	268 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	PEBP1	P30086	187 aa	Known RBP	13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	CTH	P32929	405 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	IL15RA	Q13261	267 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	FZD2	Q14332	565 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	ERAS	Q7Z444	233 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	LYZL2	Q7Z4W2	148 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	CALHM1	Q8IU99	346 aa		13.39	□□□□□ -0.27
CIRBP-228	ENST00000590347	OR52M1	Q8NGK5	317 aa		13.39	□□□□□ -0.27

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