RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 CST1P01037 141 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 HOXB6P17509 224 aaKnown RBP10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 GABRA2P47869 451 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 MZT1Q08AG7 82 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 SLC36A3Q495N2 470 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 ARSJQ5FYB0 599 aaPredicted RBP10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 CASC10Q5T4H9 136 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 ETV3LQ6ZN32 361 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 TMEM185AQ8NFB2 350 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 OR51L1Q8NGJ5 315 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 SGK3Q96BR1 496 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 MED30Q96HR3 178 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 LYZL4Q96KX0 146 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 DHRS1Q96LJ7 313 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 ASCL2Q99929 193 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 NDEL1Q9GZM8 345 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 REEP1Q9H902 201 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 SP140LQ9H930 580 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 ZNF319Q9P2F9 582 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 ZNF222Q9UK12 451 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 TMEM5Q9Y2B1 443 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 SAMHD1Q9Y3Z3 626 aaKnown RBP10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 U3KQV3 271 aa10.24□□□□□ -0.77
PRKCSH-210ENST00000589990 hCG_38984A0A1B0GV85 526 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 MEX3AA1L020 520 aaKnown RBP10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 ERICH4A6NGS2 130 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 OR2AT4A6NND4 320 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 TBX1O43435 398 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 RHBDL1O75783 438 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 RENP00797 406 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 KPNB1Q14974 876 aaKnown RBP10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 SSX2Q16385 188 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 SMARCD3Q6STE5 483 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 DCXRQ7Z4W1 244 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 COPS4Q9BT78 406 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 PAPOLGQ9BWT3 736 aaKnown RBP10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 DNTTIP1Q9H147 329 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 KRCC1Q9NPI7 259 aaPredicted RBP10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 CENPMQ9NSP4 180 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 NLKQ9UBE8 527 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 AP4S1Q9Y587 144 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 LYVE1Q9Y5Y7 322 aa10.23□□□□□ -0.77
PRKCSH-210ENST00000589990 ANKRD65E5RJM6 399 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 E2F6O75461 281 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 TIPRLO75663 272 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 DUS4LO95620 317 aaKnown RBP10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 PSG2P11465 335 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 IFNGR2P38484 337 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 GSK3AP49840 483 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 HMGA2P52926 109 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 LGALS4P56470 323 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 ACTR3P61158 418 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 ZNF273Q14593 569 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 GFOD2Q3B7J2 385 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 DMRTC1Q5HYR2 192 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 SLC35F1Q5T1Q4 408 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 TMEM200BQ69YZ2 307 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 MRPL41Q8IXM3 137 aaKnown RBP10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 C10orf67Q8IYJ2 551 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 DTX3Q8N9I9 347 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 CYB561A3Q8NBI2 242 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 OR4M1Q8NGD0 313 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 FANK1Q8TC84 345 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 HPSE2Q8WWQ2 592 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 REEP6Q96HR9 211 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 KCNJ15Q99712 375 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 FUZQ9BT04 418 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 OR52D1Q9H346 318 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 HEXA-AS1Q9H8Q6 139 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 DNAJB9Q9UBS3 223 aa10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 TSSC4Q9Y5U2 329 aaPredicted RBP10.22□□□□□ -0.77
PRKCSH-210ENST00000589990 SH2D7A6NKC9 451 aaPredicted RBP10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 ZNF850A8MQ14 1090 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 XRCC2O43543 280 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 CCNB2O95067 398 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 NHLRC4P0CG21 123 aaPredicted RBP10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 ZNF823P16415 610 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 ACKR3P25106 362 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 NOS3P29474 1203 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 DCTDP32321 178 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 DDOSTP39656 456 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 CEBPDP49716 269 aaPredicted RBP10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 KHDC1LQ5JSQ8 128 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 C18orf65Q6ZTR6 163 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 PRSS45Q7RTY3 260 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 OR4C15Q8NGM1 316 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 OR10Z1Q8NGY1 313 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 OR5K1Q8NHB7 308 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 RPS4Y2Q8TD47 263 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 TFAP2CQ92754 450 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 SLAMF6Q96DU3 332 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 IFT27Q9BW83 186 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 VNN3Q9NY84 501 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 COMMD3-BMI1R4GMX3 469 aa10.21□□□□□ -0.77
PRKCSH-210ENST00000589990 STARD9Q9P2P6 4700 aa10.21□□□□□ -0.78
PRKCSH-210ENST00000589990 ODF3BA8MYP8 253 aa10.2□□□□□ -0.78
PRKCSH-210ENST00000589990 ARPC3O15145 178 aa10.2□□□□□ -0.78
PRKCSH-210ENST00000589990 ARG1P05089 322 aa10.2□□□□□ -0.78
PRKCSH-210ENST00000589990 ANXA2P07355 339 aaKnown RBP10.2□□□□□ -0.78
PRKCSH-210ENST00000589990 SPARCP09486 303 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms