RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 NDEL1Q9GZM8 345 aa6.3□□□□□ -1.4
VAT1-207ENST00000589828 NSRP1Q9H0G5 558 aaKnown RBP6.3□□□□□ -1.4
VAT1-207ENST00000589828 CENPMQ9NSP4 180 aa6.3□□□□□ -1.4
VAT1-207ENST00000589828 VNN3Q9NY84 501 aa6.3□□□□□ -1.4
VAT1-207ENST00000589828 USE1Q9NZ43 259 aa6.3□□□□□ -1.4
VAT1-207ENST00000589828 FRRS1LQ9P0K9 344 aa6.3□□□□□ -1.4
VAT1-207ENST00000589828 SCOCQ9UIL1 159 aa6.3□□□□□ -1.4
VAT1-207ENST00000589828 KCNG2Q9UJ96 466 aa6.3□□□□□ -1.4
VAT1-207ENST00000589828 TMEM5Q9Y2B1 443 aa6.3□□□□□ -1.4
VAT1-207ENST00000589828 HERC2O95714 4834 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 TRBV4-1A0A0J9YWV2 114 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 RFPL4AA6NLU0 287 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 RFPL4AL1F8VTS6 287 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 ARPC3O15145 178 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 MTRF1O75570 445 aaKnown RBP6.29□□□□□ -1.4
VAT1-207ENST00000589828 PIPP12273 146 aaPredicted RBP6.29□□□□□ -1.4
VAT1-207ENST00000589828 ZNF823P16415 610 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 AZGP1P25311 298 aaKnown RBP6.29□□□□□ -1.4
VAT1-207ENST00000589828 ECI1P42126 302 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 SLC7A2P52569 658 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 DYNC1I2Q13409 638 aaKnown RBP6.29□□□□□ -1.4
VAT1-207ENST00000589828 TMED1Q13445 227 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 TIGD6Q17RP2 521 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 ERICH5Q6P6B1 374 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 SMARCD3Q6STE5 483 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 KCTD8Q6ZWB6 473 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 THAP5Q7Z6K1 395 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 OR8J3Q8NGG0 315 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 OR51L1Q8NGJ5 315 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 TSPEARQ8WU66 669 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 SLAMF6Q96DU3 332 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 RAX2Q96IS3 184 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 RNF170Q96K19 258 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 RTL8AQ9BWD3 113 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 TMEM120AQ9BXJ8 343 aa6.29□□□□□ -1.4
VAT1-207ENST00000589828 ZMAT5Q9UDW3 170 aaKnown RBP6.29□□□□□ -1.4
VAT1-207ENST00000589828 PSMB11A5LHX3 300 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 TMEM210A6NLX4 147 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 ANXA2P2A6NMY6 339 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 FAM220BPB1ANY3 271 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 ANXA2P07355 339 aaKnown RBP6.28□□□□□ -1.4
VAT1-207ENST00000589828 VAMP1P23763 118 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 PRDX2P32119 198 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 CX3CR1P49238 355 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 GPM6AP51674 278 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 OR12D2P58182 307 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 MAGOHP61326 146 aaKnown RBP6.28□□□□□ -1.4
VAT1-207ENST00000589828 CYLC2Q14093 348 aaPredicted RBP6.28□□□□□ -1.4
VAT1-207ENST00000589828 GFOD2Q3B7J2 385 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 SLC35F1Q5T1Q4 408 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 LCN8Q6JVE9 175 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 KCTD18Q6PI47 426 aaPredicted RBP6.28□□□□□ -1.4
VAT1-207ENST00000589828 ACP7Q6ZNF0 438 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 FAM57BQ71RH2 274 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 RRM2BQ7LG56 351 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 TCF23Q7RTU1 214 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 OVCH2Q7RTZ1 564 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 CPLX4Q7Z7G2 160 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 CALHM1Q8IU99 346 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 CSNK2A3Q8NEV1 391 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 OR13D1Q8NGV5 346 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 PIGCQ92535 297 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 ZNF488Q96MN9 340 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 NOL4LQ96MY1 436 aaPredicted RBP6.28□□□□□ -1.4
VAT1-207ENST00000589828 SLC25A33Q9BSK2 321 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 FUZQ9BT04 418 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 OR51I2Q9H344 312 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 OR52D1Q9H346 318 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 ANKRD19PQ9H560 264 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 RABEP2Q9H5N1 569 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 LIN7BQ9HAP6 207 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 TBC1D23Q9NUY8 699 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 NKIRAS1Q9NYS0 192 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 MPC1Q9Y5U8 109 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 ENPP4Q9Y6X5 453 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 COMMD3-BMI1R4GMX3 469 aa6.28□□□□□ -1.4
VAT1-207ENST00000589828 CSMD3Q7Z407 3707 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 hCG_1809904A0A1W2PP81 198 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 A0A1W2PPE2 198 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 A0A1W2PPH5 198 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 A0A1W2PR64 198 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 A0A1W2PRQ8 180 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 A0A1W2PRV1 198 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 DHRS12A0PJE2 317 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 NUDT19A8MXV4 375 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 CST4P01036 141 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 H1F0P07305 194 aaKnown RBP6.27□□□□□ -1.41
VAT1-207ENST00000589828 SPARCP09486 303 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 PGA5P0DJD9 388 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 ZNF728P0DKX0 622 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 IGHV1-8P0DP01 117 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 SLC6A6P31641 620 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 RAB25P57735 213 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 ZNF121P58317 390 aaPredicted RBP6.27□□□□□ -1.41
VAT1-207ENST00000589828 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.27□□□□□ -1.41
VAT1-207ENST00000589828 DGCR6Q14129 220 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 TAF13Q15543 124 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 IFI44LQ53G44 452 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 FGD3Q5JSP0 725 aa6.27□□□□□ -1.41
VAT1-207ENST00000589828 C9orf152Q5JTZ5 239 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms