RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CHST5Q9GZS9 411 aa6.49□□□□□ -1.37
ZNF540-206ENST00000589117 NARFLQ9H6Q4 476 aa6.49□□□□□ -1.37
ZNF540-206ENST00000589117 CHMP1AQ9HD42 196 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-206ENST00000589117 RAB18Q9NP72 206 aa6.49□□□□□ -1.37
ZNF540-206ENST00000589117 FSCN3Q9NQT6 498 aa6.49□□□□□ -1.37
ZNF540-206ENST00000589117 SHPKQ9UHJ6 478 aa6.49□□□□□ -1.37
ZNF540-206ENST00000589117 ANAPC10Q9UM13 185 aa6.49□□□□□ -1.37
ZNF540-206ENST00000589117 PIGLQ9Y2B2 252 aa6.49□□□□□ -1.37
ZNF540-206ENST00000589117 MEMO1Q9Y316 297 aa6.49□□□□□ -1.37
ZNF540-206ENST00000589117 V9GYS6 101 aa6.49□□□□□ -1.37
ZNF540-206ENST00000589117 TRAV14DV4A0A0A6YYC5 116 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 CEACAM18A8MTB9 384 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 F5H0A9 414 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 STMND1H3BQB6 276 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 MFNGO00587 321 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 TNFSF11O14788 317 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 SGCEO43556 437 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 SSX5O60225 188 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 ZNF205O95201 554 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 CCL4P13236 92 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 ZNF250P15622 560 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 OTX1P32242 354 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 ENDOGQ14249 297 aaKnown RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 CNN3Q15417 329 aaKnown RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 MICBQ29980 383 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 C17orf107Q6ZR85 190 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 SLC16A14Q7RTX9 510 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 GPR137CQ8N3F9 429 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 CSNK2A3Q8NEV1 391 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 ST8SIA4Q92187 359 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 EMG1Q92979 244 aaKnown RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 CCDC120Q96HB5 630 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 ARHGAP5-AS1Q96IT6 56 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 ZC3H10Q96K80 434 aaKnown RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 ZNF385AQ96PM9 386 aaKnown RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 CDX2Q99626 313 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 NICN1Q9BSH3 213 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 ST6GALNAC5Q9BVH7 336 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 RGCCQ9H4X1 137 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 SH2D2AQ9NP31 389 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 ZNF319Q9P2F9 582 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 GPR132Q9UNW8 380 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 C14orf166Q9Y224 244 aaKnown RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 LAMA1P25391 3075 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 A8MXK9 166 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 EEF1E1-BLOC1S5C9J1V9 151 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 IGLV3-1P01715 115 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 CST2P09228 141 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 SNU13P55769 128 aaKnown RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 MTCP1P56278 107 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 TMEM50BP56557 158 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 EIF5AP63241 154 aaKnown RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 SSPNQ14714 243 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 RAB35Q15286 201 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 PAN3Q58A45 887 aaKnown RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 PLAC9Q5JTB6 97 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 NSUN5P2Q63ZY6 315 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 JMJD6Q6NYC1 403 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 Q6ZSR3 168 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 Q7L0L9 218 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 OR5AP2Q8NGF4 316 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 MAFAQ8NHW3 353 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 CPT1CQ8TCG5 803 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 SSC4DQ8WTU2 575 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 C1orf147Q96MC9 270 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 STRADBQ9C0K7 418 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 METTL9Q9H1A3 318 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 METTL8Q9H825 291 aaKnown RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 PLEKHJ1Q9NW61 149 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 ZNF230Q9UIE0 474 aaPredicted RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 MRPS18CQ9Y3D5 142 aaKnown RBP6.48□□□□□ -1.37
ZNF540-206ENST00000589117 FLVCR1Q9Y5Y0 555 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 PRUNE2Q8WUY3 3088 aa6.48□□□□□ -1.37
ZNF540-206ENST00000589117 IGHV3-15A0A0B4J1V0 119 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 IGKV1-9A0A0C4DH69 117 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 A0A0J9YW62 118 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 OR5H15A6NDH6 313 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 WIPF3A6NGB9 483 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 FARS2O95363 451 aaKnown RBP6.47□□□□□ -1.37
ZNF540-206ENST00000589117 SFT2D2O95562 160 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 CELA2AP08217 269 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 TMEM225BP0DP42 221 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 LIPCP11150 499 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 FAHP16930 419 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 SERPINA2P20848 420 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 AVPR2P30518 371 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 CYB561P49447 251 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 NPY4RP50391 375 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 ATP1B3P54709 279 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 RSU1Q15404 277 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 RIPPLY2Q5TAB7 128 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 SLC23A3Q6PIS1 610 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 ADAD2Q8NCV1 583 aaKnown RBP6.47□□□□□ -1.37
ZNF540-206ENST00000589117 OR10K1Q8NGX5 313 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 NABP1Q96AH0 204 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 TECTBQ96PL2 329 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 LRFN3Q9BTN0 628 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 TM2D1Q9BX74 207 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 RASL12Q9NYN1 266 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 TAS2R3Q9NYW6 316 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms