RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TMEM171Q8WVE6 324 aa22.24■■□□□ 1.15
SCAMP4-210ENST00000588555 HIST1H2AAQ96QV6 131 aa22.24■■□□□ 1.15
SCAMP4-210ENST00000588555 ING4Q9UNL4 249 aa22.24■■□□□ 1.15
SCAMP4-210ENST00000588555 ANKHD1Q8IWZ3 2542 aaKnown RBP22.24■■□□□ 1.15
SCAMP4-210ENST00000588555 PLCE1Q9P212 2302 aa22.23■■□□□ 1.15
SCAMP4-210ENST00000588555 ZNF732B4DXR9 585 aa22.23■■□□□ 1.15
SCAMP4-210ENST00000588555 CDC14BO60729 498 aa22.23■■□□□ 1.15
SCAMP4-210ENST00000588555 TPPPO94811 219 aa22.23■■□□□ 1.15
SCAMP4-210ENST00000588555 TMEM225BP0DP42 221 aa22.23■■□□□ 1.15
SCAMP4-210ENST00000588555 TAS2R20P59543 309 aa22.23■■□□□ 1.15
SCAMP4-210ENST00000588555 BSPH1Q075Z2 132 aa22.23■■□□□ 1.15
SCAMP4-210ENST00000588555 PDZK1IP1Q13113 114 aa22.23■■□□□ 1.15
SCAMP4-210ENST00000588555 SLC22A6Q4U2R8 563 aa22.23■■□□□ 1.15
SCAMP4-210ENST00000588555 LPAR5Q9H1C0 372 aa22.23■■□□□ 1.15
SCAMP4-210ENST00000588555 IGKV1-12A0A0C4DH73 117 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 OR5B21A6NL26 309 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 CTDSPLO15194 276 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 ANGPTL7O43827 346 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 IGKV1D-12P01611 117 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 PITPNAQ00169 270 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 NUP37Q8NFH4 326 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 OR10K1Q8NGX5 313 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 RADILQ96JH8 1075 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 RNF170Q96K19 258 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 GAL3ST1Q99999 423 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 DIABLOQ9NR28 239 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 ABCD4O14678 606 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 PLATP00750 562 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 SNTB1Q13884 538 aaKnown RBP22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 MOGAT2Q3SYC2 334 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 CDH24Q86UP0 819 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 PXT1Q8NFP0 134 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 LRRC46Q96FV0 321 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 S100A13Q99584 98 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 CST11Q9H112 138 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 BANF2Q9H503 90 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 NGBQ9NPG2 151 aa22.22■■□□□ 1.15
SCAMP4-210ENST00000588555 A0A0A6YYH2 397 aa22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 A0A1W2PQ09 198 aa22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 A6NJ64 397 aa22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 B8ZZF3 427 aa22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 RAB27BO00194 218 aa22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 TIMM8AO60220 97 aaPredicted RBP22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 CRTAPO75718 401 aaPredicted RBP22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 MPIG6BO95866 241 aa22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 PRB1P04280 392 aa22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 LRP11Q86VZ4 500 aa22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 PIAS4Q8N2W9 510 aaPredicted RBP22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 ZNF611Q8N823 705 aa22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 ADAT1Q9BUB4 502 aaKnown RBP22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 TMEM59Q9BXS4 323 aa22.21■■□□□ 1.15
SCAMP4-210ENST00000588555 A0A1B0GWJ7 208 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 ISPDA4D126 451 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 METTL21EPA6NDL7 271 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 HAAOP46952 286 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 RPS23P62266 143 aaKnown RBP22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 GNG3P63215 75 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 Q6ZR03 302 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 TRIM63Q969Q1 353 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 METTL9Q9H1A3 318 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 IL36GQ9NZH8 169 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 NDRG3Q9UGV2 375 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 IGLV3-9A0A075B6K5 115 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 A0A0A6YYD4 124 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 MLNRO43193 412 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 ZG16O60844 167 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 IGHV3-13P01766 116 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 SERPINA2P20848 420 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 RPS27AP62979 156 aaKnown RBP22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 DGCR2P98153 550 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 FAM76BQ5HYJ3 339 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 ZSCAN4Q8NAM6 433 aaPredicted RBP22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 ACBD4Q8NC06 268 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 LINC01560Q8TB33 94 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 ITLN2Q8WWU7 325 aaPredicted RBP22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 GCDHQ92947 438 aaPredicted RBP22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 PHF21AQ96BD5 680 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 NICN1Q9BSH3 213 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 TMEM100Q9NV29 134 aa22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 NOP16Q9Y3C1 178 aaKnown RBP22.2■■□□□ 1.14
SCAMP4-210ENST00000588555 WIPF3A6NGB9 483 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 GSTZ1O43708 216 aaPredicted RBP22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 LANCL1O43813 399 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 PTHLHP12272 177 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 MGMTP16455 207 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 AGAP20933 346 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 SLC25A26Q70HW3 274 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 WDR86Q86TI4 376 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 OR8S1Q8NH09 359 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 OR51F2Q8NH61 342 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 SMIM4Q8WVI0 70 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 YIPF5Q969M3 257 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 RTL8AQ9BWD3 113 aa22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 ELL3Q9HB65 397 aaPredicted RBP22.19■■□□□ 1.14
SCAMP4-210ENST00000588555 HCFC1P51610 2035 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 TRAV18A0A075B6X5 111 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 H0YL77 283 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 RSU1Q15404 277 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 NCMAPQ5T1S8 102 aa22.18■■□□□ 1.14
SCAMP4-210ENST00000588555 RAB12Q6IQ22 244 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms