RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	LIF	P15018	202 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	SERPINF1	P36955	418 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	OR3A4P	P47883	348 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	AIMP2	Q13155	320 aa	Known RBP	12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	FAM27B	Q5VT28	67 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	FAM122C	Q6P4D5	195 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	PCSK4	Q6UW60	755 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	SLC38A6	Q8IZM9	456 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	SLC30A7	Q8NEW0	376 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	OR5AP2	Q8NGF4	316 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	PAQR8	Q8TEZ7	354 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	DCUN1D4	Q92564	292 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	ARL11	Q969Q4	196 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	C1orf147	Q96MC9	270 aa	Predicted RBP	12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	C12orf4	Q9NQ89	552 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	C1orf123	Q9NWV4	160 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	MBD2	Q9UBB5	411 aa		12.34	□□□□□ -0.43
NEDD4L-223	ENST00000588516	CFAP46	Q8IYW2	2715 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	IGHV1-45	A0A0A0MS14	117 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	WIPF3	A6NGB9	483 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	POM121C	A8CG34	1229 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	MPTX1	A8MV57	137 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SOCS1	O15524	211 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	IFNA21	P01568	189 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	CDA	P32320	146 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	RBMX	P38159	391 aa	Known RBP	12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SLC6A9	P48067	706 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	PCBD1	P61457	104 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SCRN3	Q0VDG4	424 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	MFAP5	Q13361	173 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SMCO1	Q147U7	214 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	RAB35	Q15286	201 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	HLA-B	Q31612	363 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SLC22A6	Q4U2R8	563 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	C17orf107	Q6ZR85	190 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	LHFPL1	Q86WI0	220 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	BAP18	Q8IXM2	172 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	TMEM156	Q8N614	296 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	ADAD2	Q8NCV1	583 aa	Known RBP	12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	OR9K2	Q8NGE7	335 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	MRPS24	Q96EL2	167 aa	Known RBP	12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SAT2	Q96F10	170 aa	Predicted RBP	12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	PIK3IP1	Q96FE7	263 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	ARHGAP5-AS1	Q96IT6	56 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	IMMP1L	Q96LU5	166 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	ULBP2	Q9BZM5	246 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	METTL9	Q9H1A3	318 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	RGCC	Q9H4X1	137 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	METTL8	Q9H825	291 aa	Known RBP	12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	ZNF230	Q9UIE0	474 aa	Predicted RBP	12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	HSF4	Q9ULV5	492 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	CSAG2	Q9Y5P2	127 aa		12.33	□□□□□ -0.44
NEDD4L-223	ENST00000588516	LOC100509620	A0A075B734	347 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	TSPAN4	O14817	238 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	FGF16	O43320	207 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SCO1	O75880	301 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	CST2	P09228	141 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	BLVRB	P30043	206 aa	Predicted RBP	12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	OTX1	P32242	354 aa	Predicted RBP	12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SNU13	P55769	128 aa	Known RBP	12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	PPIA	P62937	165 aa	Known RBP	12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	MC2R	Q01718	297 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	BTN1A1	Q13410	526 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	STK11	Q15831	433 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	LRRC37A5P	Q49AS3	106 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	PLAC9	Q5JTB6	97 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	PDSS1	Q5T2R2	415 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	RAET1L	Q5VY80	246 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	ELP2	Q6IA86	826 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	PLXDC2	Q6UX71	529 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	IL34	Q6ZMJ4	242 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	RPS19BP1	Q86WX3	136 aa	Known RBP	12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	WDFY1	Q8IWB7	410 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SGPP2	Q8IWX5	399 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	C20orf196	Q8IYI0	205 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	SEMA6D	Q8NFY4	1073 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	IFI44	Q8TCB0	444 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	MR1	Q95460	341 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	MRGPRF	Q96AM1	343 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	NTNG2	Q96CW9	530 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	AQP10	Q96PS8	301 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	NKX3-1	Q99801	234 aa	Predicted RBP	12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	AIFM2	Q9BRQ8	373 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	NICN1	Q9BSH3	213 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	PECR	Q9BY49	303 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	HPF1	Q9NWY4	346 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	OSGIN2	Q9Y236	505 aa		12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.32	□□□□□ -0.44
NEDD4L-223	ENST00000588516	ALPK2	Q86TB3	2170 aa		12.31	□□□□□ -0.44
NEDD4L-223	ENST00000588516	CABIN1	Q9Y6J0	2220 aa		12.31	□□□□□ -0.44
NEDD4L-223	ENST00000588516		A0A0A6YYD4	124 aa		12.31	□□□□□ -0.44
NEDD4L-223	ENST00000588516	LY6G6E	A0A0G2JKS1	128 aa		12.31	□□□□□ -0.44
NEDD4L-223	ENST00000588516	LINC01387	J3KSC0	135 aa		12.31	□□□□□ -0.44
NEDD4L-223	ENST00000588516		M0R135	149 aa		12.31	□□□□□ -0.44
NEDD4L-223	ENST00000588516	CCS	O14618	274 aa		12.31	□□□□□ -0.44
NEDD4L-223	ENST00000588516	TPD52L2	O43399	206 aa	Known RBP	12.31	□□□□□ -0.44
NEDD4L-223	ENST00000588516	IFNA2	P01563	188 aa		12.31	□□□□□ -0.44
NEDD4L-223	ENST00000588516	FCGR2A	P12318	317 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms