RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 NUDCD2Q8WVJ2 157 aa12.79□□□□□ -0.36
CCDC43-203ENST00000588210 PHB2Q99623 299 aa12.79□□□□□ -0.36
CCDC43-203ENST00000588210 VRK1Q99986 396 aaPredicted RBP12.79□□□□□ -0.36
CCDC43-203ENST00000588210 MRPL13Q9BYD1 178 aaKnown RBP12.79□□□□□ -0.36
CCDC43-203ENST00000588210 MS4A7Q9GZW8 240 aaPredicted RBP12.79□□□□□ -0.36
CCDC43-203ENST00000588210 WDR13Q9H1Z4 485 aa12.79□□□□□ -0.36
CCDC43-203ENST00000588210 IFT46Q9NQC8 304 aa12.79□□□□□ -0.36
CCDC43-203ENST00000588210 B3GAT1Q9P2W7 334 aa12.79□□□□□ -0.36
CCDC43-203ENST00000588210 RP1L1Q8IWN7 2480 aaPredicted RBP12.79□□□□□ -0.36
CCDC43-203ENST00000588210 DNAJC13O75165 2243 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 POLEQ07864 2286 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 GTF3C1Q12789 2109 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 LINC01387J3KSC0 135 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 ZNHIT1O43257 154 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 ERCC1P07992 297 aaPredicted RBP12.78□□□□□ -0.36
CCDC43-203ENST00000588210 LAP3P28838 519 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 CA7P43166 264 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 EIF1AXP47813 144 aaKnown RBP12.78□□□□□ -0.36
CCDC43-203ENST00000588210 ZNF41P51814 821 aaPredicted RBP12.78□□□□□ -0.36
CCDC43-203ENST00000588210 GFRA1P56159 465 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 OR52W1Q6IF63 320 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 GVQW1Q8N7I0 195 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 ADPRHL1Q8NDY3 354 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 OR5D14Q8NGL3 314 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 PPP1R1CQ8WVI7 109 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 PIGQQ9BRB3 760 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 ANAPC10Q9UM13 185 aa12.78□□□□□ -0.36
CCDC43-203ENST00000588210 RPH3AQ9Y2J0 694 aaPredicted RBP12.78□□□□□ -0.36
CCDC43-203ENST00000588210 TRGV8A0A0C4DH27 118 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 SMAD9O15198 467 aaKnown RBP12.77□□□□□ -0.36
CCDC43-203ENST00000588210 SSX5O60225 188 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 HRH1P35367 487 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 LUMP51884 338 aaPredicted RBP12.77□□□□□ -0.36
CCDC43-203ENST00000588210 ATP1B3P54709 279 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 TAF13Q15543 124 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 C3AR1Q16581 482 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 SLC22A6Q4U2R8 563 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 THEM4Q5T1C6 240 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 RAET1LQ5VY80 246 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 OR2W3Q7Z3T1 314 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 DOLPP1Q86YN1 238 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 NOXO1Q8NFA2 376 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 OR13C9Q8NGT0 318 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 OR10R2Q8NGX6 335 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 MRGPRX4Q96LA9 322 aa12.77□□□□□ -0.36
CCDC43-203ENST00000588210 SULT2B1O00204 365 aa12.77□□□□□ -0.37
CCDC43-203ENST00000588210 ZNF17P17021 662 aa12.77□□□□□ -0.37
CCDC43-203ENST00000588210 IL13RA1P78552 427 aa12.77□□□□□ -0.37
CCDC43-203ENST00000588210 C4orf17Q53FE4 359 aa12.77□□□□□ -0.37
CCDC43-203ENST00000588210 FAM74A1Q5RGS3 127 aa12.77□□□□□ -0.37
CCDC43-203ENST00000588210 AWAT2Q6E213 333 aa12.77□□□□□ -0.37
CCDC43-203ENST00000588210 CFAP77Q6ZQR2 320 aa12.77□□□□□ -0.37
CCDC43-203ENST00000588210 SEC22AQ96IW7 307 aa12.77□□□□□ -0.37
CCDC43-203ENST00000588210 EMC6Q9BV81 110 aa12.77□□□□□ -0.37
CCDC43-203ENST00000588210 TINAGQ9UJW2 476 aa12.77□□□□□ -0.37
CCDC43-203ENST00000588210 LHFPL6Q9Y693 200 aa12.77□□□□□ -0.37
CCDC43-203ENST00000588210 OR2AT4A6NND4 320 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 ZNF878C9JN71 531 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 H3BML4 177 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 DUS4LO95620 317 aaKnown RBP12.76□□□□□ -0.37
CCDC43-203ENST00000588210 CHRM2P08172 466 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 GNB3P16520 340 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 ZNF20P17024 532 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 CTRB1P17538 263 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 ZNF93P35789 620 aaPredicted RBP12.76□□□□□ -0.37
CCDC43-203ENST00000588210 EIF1P41567 113 aaKnown RBP12.76□□□□□ -0.37
CCDC43-203ENST00000588210 STARP49675 285 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 PRKXP51817 358 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 B3GALT5-AS1P59052 145 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 TAS2R31P59538 309 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 PLPPR5Q32ZL2 321 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 LRRC37A5PQ49AS3 106 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 CTRB2Q6GPI1 263 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 PRDM14Q9GZV8 571 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 LPAR5Q9H1C0 372 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 C12orf4Q9NQ89 552 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 LOC100509620A0A075B734 347 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 FIGNL2A6NMB9 653 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 DBX1A6NMT0 343 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 SHISA8B8ZZ34 492 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 EFNA2O43921 213 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 WDR1O75083 606 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 GSTP1P09211 210 aaKnown RBP12.76□□□□□ -0.37
CCDC43-203ENST00000588210 PGA4P0DJD7 388 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 PGA3P0DJD8 388 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 NAT1P18440 290 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 ADH6P28332 368 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 MYBPHQ13203 477 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 RHOUQ7L0Q8 258 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 TMEM17Q86X19 198 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 HOGA1Q86XE5 327 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 UEVLDQ8IX04 471 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 GTPBP8Q8N3Z3 284 aaPredicted RBP12.76□□□□□ -0.37
CCDC43-203ENST00000588210 OR52H1Q8NGJ2 320 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 THAP6Q8TBB0 222 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 ZNF75AQ96N20 296 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 ZNF471Q9BX82 626 aaPredicted RBP12.76□□□□□ -0.37
CCDC43-203ENST00000588210 SELENOIQ9C0D9 397 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 FN3KRPQ9HA64 309 aa12.76□□□□□ -0.37
CCDC43-203ENST00000588210 SH3BGRL2Q9UJC5 107 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms